RU09915 sequence (584 bp)


Member Information
CTTCCATAGTCCCCCCAAATTTCACCGGACTGTGGAAGCAACGCTCGGTCGTTCTTCGCTTCTCGGCGCTCACTCGCATCTT
TCACTTCGGTCTCCTTCAACTAAACCAGGTTCAGTTTCTCTCTTTTCTCGATCATTCTCCCTTTCTTGCGTTAATCATTGTT
CACTCTTTCCTTCAATCCCCTCTACCTTCTTCTTCCCTTCAATCCCCTCTACCTTCTTCTTCTTCTTCTATCTCTTTGGTGT
CTGGGTAGTTAGATCTGCTAAGATTTTGATCAATTTGTTGTCTGAGTAGATTGACCTGGTAAGAATTGTGATCCAACCAATA
GAATTGAGGCAACCCGGAAACTTTCCATTTGCCAAGTACCCAGATATCATAGCATTGTAAGAAACTGAACTCCTCCAACCCA
TTGCATTAAACAGACGCAGAGCCTCTTCGCATTGGCCATTGCGCATTTGGGTACTGATTTCCATGTTAAATTTAACAACTTC
CGAGTCGAAAGCATTTGACAACCTATTCATGGAACTCTTCTGCTTCTGGGTCTTTGTTTTCTTCCATGGGATTGGGTTTGGG
TTAGTGGGTA


RU09915 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
02103

Probe ID Probe Sequeces


RU09915 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO68171 unnamed protein product [Vitis vinifera] 180 6e-012
NP_192184 pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] 177 1e-011
ABE80149 Tetratricopeptide-like helical [Medicago truncatula] 177 1e-011
NP_001062888 Os09g0327200 [Oryza sativa (japonica cultivar-group)] 132 2e-006
EAZ08632 hypothetical protein OsI_029864 [Oryza sativa (indica cultivar-group)] 132 2e-006

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9SY02 Pentatricopeptide repeat-containing protein At4g02750 153 7e-010
Q9FI80 Pentatricopeptide repeat-containing protein At5g48910 118 8e-006

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9T7E9 Pentatricopeptide repeat-containing protein, putative 192 2e-013
A7PH47 Chromosome chr17 scaffold_16, whole genome shotgun sequence 174 3e-011
Q1SN04 Tetratricopeptide-like helical 172 5e-011
A2YZX1 Putative uncharacterized protein 130 4e-006
Q6K2P5 Os09g0327200 protein 130 4e-006

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G02750.1 pentatricopeptide (PPR) repeat-containing protein 153 8e-011
AT5G48910.1 pentatricopeptide (PPR) repeat-containing protein 118 9e-007