RU10088 sequence (440 bp)


Member Information
TTTGAGTTAGAAAAACTGCACGTATTGCAATTGGCAACATGCTACCATATAGCATCAATAGTTCAAAATTCTTCGTCGGCCT
CAATGTGTCGAGACTGCCTCAACTGTGGTCATTCTGTTTTCTTCATCAAAGACTTGTTGAATATCCTTGAGTGCATCTCCAG
ACTTTTCTTTAAGCACTCGTTCAATCCCCATTTTCATGGTGGTTGTTGAGCTAGGACAGCTTCCACAAGCCCCTTGGAGCTT
GAGAGAAACGACGCCGTCTTCGACGGACACAACGTCGACGTTTCCACCATCGGCGATGAGATAGGGGCGGACGTCCTCGAGG
ACCAAGTCGACGTTGGGAACTGTGAGCTCGAATTGCTTGGCCGAGTAGAGTCCCGGAGAAGATGAAGAAGAAGAAGAAGACG
ACTCGGCGGCAGCGCTTGCGTTCGAAGCTC


RU10088 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
12003

Probe ID Probe Sequeces


RU10088 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO40148 unnamed protein product [Vitis vinifera] 443 7e-043
NP_567219 NFU1 (NFU domain protein 1) [Arabidopsis thaliana] 418 6e-040
AAD22656 putative NifU-like metallocluster assembly factor [Arabidopsis thaliana] 401 5e-038
EAY89758 hypothetical protein OsI_010991 [Oryza sativa (indica cultivar-group)] 389 1e-036
NP_001049935 Os03g0314700 [Oryza sativa (japonica cultivar-group)] 384 5e-036

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q93W77 NifU-like protein 1, chloroplastic 316 4e-029
Q84LK7 NifU-like protein 1, chloroplastic 165 1e-011
Q93W20 NifU-like protein 2, chloroplastic 165 1e-011
Q84RQ7 NifU-like protein 3, chloroplastic 150 8e-010
P33179 Nitrogen fixation protein nifU (Fragment) 115 9e-006

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7Q0R3 Chromosome chr7 scaffold_42, whole genome shotgun sequence 337 1e-030
B9GSW6 Predicted protein 335 2e-030
B9RNA2 Nitrogen fixation protein nifU, putative 331 6e-030
B8AMY7 Putative uncharacterized protein 306 5e-027
B9F844 Putative uncharacterized protein 301 2e-026

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G01940.1 NFU1; structural molecule 316 5e-030
AT5G49940.1 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule 165 2e-012
AT5G49940.2 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule 165 2e-012
AT4G25910.1 NFU3; structural molecule 150 1e-010