RU10480 sequence (609 bp)


Member Information
GGAAGAGAGAGAGAGTGTGTGAGAGAGTTTTTAGAGTGAGAAGAAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAA
ACAATGGGGAAATCTAACTCTTGCTCTCAAATTATCACATGCGGAAACGATTCAGCGGACAAAGACGGTCTCGAAGTTTCTG
AGAGCAAGGGTTCAGGTGACAAACGTGGCTGGAGTTTCCGTAAGAGGTCTGCACGGGATCGAGTGCTAAGCAGCACTGTGAT
CACCGAAACCCCCACTTCAGGGAATAAGGAGAGCCCAGAATCTGCCCCTCTTACTTTCCAATCACCGGTAAGCACGACTGTT
CCAGAGAAAGTATCTGTAATACGATGCACTGATGAGAAACCACAGTTGGTGACTCCTGAGAACCCAAAAGTTTCTACAACTG
AAGATGCCTCCGAAGATCAAAGTAAGGTTGAGGACAAACTGGATGAGTCTGCTGTTGTTGTTGTCCAGACTGCTGTCAGAGG
ATTATTGGCTCAAAGATCATTGCTGGAGCTGAAAAATGTAGTCAAGTTGCAAGCTGCTGTCCGTGGCCATTTGGTGCGTAGG
CATGCTGTTGGAACTTTGCGTTGTTTTCAAGCCAT


RU10480 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
03014

Probe ID Probe Sequeces
yueji_07451ATTGGCTCAAAGATCATTGCTGGAGCTGAAAAATGTAGTCAAGTTGCAAGCTGCTGTCCG bl2seq


RU10480 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAN81590 hypothetical protein [Vitis vinifera] 246 1e-019
NP_564097 IQD32 (IQ-domain 32); calmodulin binding [Arabidopsis thaliana] 212 1e-015
AAG12559 Unknown Protein [Arabidopsis thaliana] 212 1e-015
Q9FXI5 Protein IQ-DOMAIN 32 212 1e-015
NP_001060851 Os08g0115200 [Oryza sativa (japonica cultivar-group)] 146 6e-008

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9FXI5 Protein IQ-DOMAIN 32 212 1e-016
Q8L4D8 Protein IQ-DOMAIN 31 131 3e-007

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9R858 Putative uncharacterized protein 552 5e-055
B9H4K1 Predicted protein 449 4e-043
B9GQY2 Predicted protein 342 1e-030
A5BY17 Putative uncharacterized protein 246 1e-019
B8LKS1 Putative uncharacterized protein 200 3e-014

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G19870.1 iqd32 (IQ-domain 32); calmodulin binding 212 1e-017
AT4G00820.1 iqd17 (IQ-domain 17); calmodulin binding 180 6e-014
AT1G01110.2 IQD18 (IQ-domain 18) 176 2e-013
AT4G14750.1 IQD19 (IQ-domain 19); calmodulin binding 146 5e-010
AT3G22190.1 IQD5 (IQ-domain 5); calmodulin binding 142 2e-009