RU11260 sequence (381 bp)


Member Information
GAGAAGGCCGTGGGGCAAGTTTTAGACGGACGGAAGAATCCGTGACCCGGCCCGGAAGGGGAGCCGGGTCTGGCTGGGGACG
TTTGACACTGATGTGGATGCTGCTAAGGCCTATGATTTTGCTGCATTCAAGCTCAGGGGAAGGAAAGCTATACTGAATTTTC
CGCTGGAGGCCGGAGAGTCCGACCCGCCAAGTAATACGGGTCGGAAAAGGAGGAAGTCAGTGAAGCCAGAGGAGGAGGAGGA
GGCGGCGGCGTCGGCTCCGGAGGCGGAAGAGGTGGAGGTTCAAAAGTTGGGTAGATTTGGGGAATGGGAGAAGATGCCTGAA
AGCTCGTCTGGTTTCTCACGATCATGGGTGTGGGTGTATCAATGGGTGTGGGT


RU11260 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
11002

Probe ID Probe Sequeces
yueji_14942ATGATTTTGCTGCATTCAAGCTCAGGGGAAGGAAAGCTATACTGAATTTTCCGCTGGAGG bl2seq


RU11260 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
AAO34706 ethylene response factor 4 [Lycopersicon esculentum] 303 1e-026
AAQ56115 transcription-factor-like protein [Boechera drummondii] 299 4e-026
AAX20036 ethylene responsive element binding protein C3 [Capsicum annuum] 297 6e-026
AAR15484 AP2 transcription factor [Olimarabidopsis pumila] 296 8e-026
AAR15465 AP2 transcription factor [Capsella rubella] 296 8e-026

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9LY05 Ethylene-responsive transcription factor ERF106 227 5e-019
Q9FKG2 Ethylene-responsive transcription factor ERF107 222 2e-018
O80341 Ethylene-responsive transcription factor 5 192 6e-015
Q40478 Ethylene-responsive transcription factor 5 181 1e-013
Q8VZ91 Ethylene-responsive transcription factor 6 175 6e-013

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9R9Y6 DNA binding protein, putative 246 5e-020
Q84XB0 Ethylene response factor 4 238 4e-019
Q75UJ5 ERF-like protein 232 2e-018
Q32W73 Ethylene responsive element binding protein C3 231 3e-018
Q6WEP6 Transcription-factor-like protein 230 4e-018

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G07580.1 DNA binding / transcription factor 227 8e-020
AT5G61590.1 AP2 domain-containing transcription factor family protein 222 3e-019
AT5G47230.1 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription activator/ transcription factor 192 9e-016
AT4G17490.1 ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6); DNA binding / transcription factor 175 8e-014
AT5G51190.1 AP2 domain-containing transcription factor, putative 172 2e-013