RU11516 sequence (236 bp)


Member Information
GCTGCCACACCACGAACGCAGACCCGTCCTCGTTCCACGATATGACGTCGTCCGTTGCCGGATCCTCCACCAGCATGTACGT
CTTCAACAAGAAAGGCGGCGGGCTCGACTTCCTCACGTATTCCAACAGACCCTTTTGATCACACACACCCTCCATTGATGGA
ATGAAACTTCGAGATAAGACAGCTAGGGATTGTGCTGGATCGAAACAAGAAGATGAGGCTAGCTAACAAGGA


RU11516 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
02002

Probe ID Probe Sequeces
yueji_03507GATAAGACAGCTAGGGATTGTGCTGGATCGAAACAAGAAGATGAGGCTAGCTAACAAGGA bl2seq


RU11516 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_001063726 Os09g0526600 [Oryza sativa (japonica cultivar-group)] 162 3e-010
BAD46358 putative heat shock factor [Oryza sativa Japonica Group] 162 3e-010
EAZ09820 hypothetical protein OsI_031052 [Oryza sativa (indica cultivar-group)] 162 3e-010
ABG73443 heat shock factor [Oryza brachyantha] 159 8e-010
ACG47338 unknown [Zea mays] 159 8e-010

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q652B0 Heat stress transcription factor B-2c 162 2e-011
Q6Z9C8 Heat stress transcription factor B-2b 153 2e-010
P22335 Heat shock factor protein HSF24 149 7e-010
O22230 Heat stress transcription factor B-3 149 7e-010
Q96320 Heat stress transcription factor B-1 147 1e-009

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9II85 Predicted protein 225 2e-017
B9H9T1 Predicted protein 217 1e-016
B9SU43 Heat shock factor protein, putative 213 4e-016
A2Z3A9 Putative uncharacterized protein 162 3e-010
B8AMF0 Putative uncharacterized protein 162 3e-010

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT2G41690.1 AT-HSFB3; DNA binding / transcription factor 149 6e-011
AT4G36990.1 HSF4 (HEAT SHOCK FACTOR 4); DNA binding / transcription factor/ transcription repressor 147 1e-010
AT4G11660.1 AT-HSFB2B; transcription factor/ transcription repressor 145 2e-010
AT5G62020.1 AT-HSFB2A; DNA binding / transcription factor 143 3e-010
AT1G46264.1 AT-HSFB4; DNA binding / transcription factor 137 1e-009