RU13460 sequence (697 bp)


Member Information
GAATGAAATTGAATGGTCTCCTCCTCCTCCTCCACCTTCTTCTTCTTCACTAGCGCGCTGGGGTTTCTATCTGTACGGAACT
CACTGAAGAAAGCCATTTTCTCACGCAGAACGAGCTCGGCTATTTCAGCTGCCTCAGGCATGGATTGCAATTCAAGCTTGTA
CNGTTGGTGCTGCGCAGGCAAATCGCAGGCGGAAAGTAACATTGCTGAGGGGCTGAAGAACAGTAACGCTCTGAAGCTCAGT
GACAACGGTGAGCTTTCAATTCTGTTAGACTCGGAATTGAAGAAACCGTTCAAGGAAGACGACGCTTTTGGAATCGACTCGT
TCATGAACTCTCTCTCCACCGATCGGTTCGGTAGGTTGCTGCTTTGGTCGCCGCGCTTGCCGTCGACGCAGGACGTCGTTTC
TCAGAATTTCTGTGAGCTTCCAAACGGTGCGGTTTGTGTTGCTGATGTTCAGTACAAAGGGCGAGGCAGGTCGAAGAATGTG
TGGGAGTCTCCCAAAGGTTGCCTGCTGTTTTCCTTTACTCTGCAGATGGAGGATGGGCGGATCGTGCCACTGATACAATATG
TGGTGTCTCTAGCCATCACTGAGGCCATAAAGGATGTTTGTGATAGGAATGGCTTGCCATATATTGATGTTAGAATAAAATG
GCCAAATGATTTATATTTGAATGGCCTCAAAGTTGGAGGCT


RU13460 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01012

Probe ID Probe Sequeces


RU13460 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
AAL93108 holocarboxylase synthetase 1 [Arabidopsis thaliana] 688 1e-070
NP_565605 HCS1 (HOLOCARBOXYLASE SYNTHASE); catalytic [Arabidopsis thaliana] 685 2e-070
CAO61807 unnamed protein product [Vitis vinifera] 675 4e-069
NP_850957 HCS2 (HOLOCARBOXYLASE SYNTHETASE 2); catalytic [Arabidopsis thaliana] 644 1e-065
AAF19230 Putative biotin holocarboxylase synthetase [Arabidopsis thaliana] 644 1e-065

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q920N2 Biotin--protein ligase 212 1e-016
P50747 Biotin--protein ligase 209 3e-016
O14353 Biotin--protein ligase 184 3e-013
P46363 Bifunctional protein birA 162 9e-011
P06709 Bifunctional protein birA 144 1e-008

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
Q8S4V8 Holocarboxylase synthetase 1 676 3e-069
Q9SL92 At2g25710 676 3e-069
A7NV74 Chromosome chr18 scaffold_1, whole genome shotgun sequence 675 3e-069
B9GUF0 Predicted protein 675 3e-069
B9H7A8 Predicted protein 670 1e-068

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT2G25710.1 HCS1 (HOLOCARBOXYLASE SYNTHASE); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic 676 2e-071
AT2G25710.2 HCS1 (HOLOCARBOXYLASE SYNTHASE); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic 676 2e-071
AT1G37150.3 HCS2 (holocarboxylase synthetase 2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic 644 1e-067
AT1G37150.2 HCS2 (holocarboxylase synthetase 2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic 644 1e-067
AT1G37150.4 HCS2 (holocarboxylase synthetase 2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic 467 4e-047