Member Information |
| CGTTTACAGAGAACAGTAACCTTGTTAGGCAGCACTAGTTGTGCCTCATTTTTAGTAGATCTACACTTGACTTTTGGTTGCT CCTTTTCAGAATCTGACAATTCAAAGTTAAACTTTACTTTGCAAGGAGGGCAGAAATAATCAGTGCCCCCCAAATTCTTATA ATAATTGGTGTTAATTCTATCACATTCTGCATGCACCCATACTCTGCAACCATCACACCGGACCCAAGTTCCACTGTCAGG |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 2 | 0 | 0 | 0 | 2 |
| Probe ID | Probe Sequeces |
| yueji_12558 | AATTGGTGTTAATTCTATCACATTCTGCATGCACCCATACTCTGCAACCATCACACCGGA bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO48521 | unnamed protein product [Vitis vinifera] | 338 | 1e-030 |
| CAO39775 | unnamed protein product [Vitis vinifera] | 271 | 8e-023 |
| NP_200155 | SDG29 (SET DOMAIN GROUP 29); DNA binding [Arabidopsis thaliana] | 270 | 1e-022 |
| NP_194520 | PHD finger protein-related / SET domain-containing protein (TX4) [Arabidopsis thaliana] | 253 | 1e-020 |
| BAE99361 | trithorax 3 [Arabidopsis thaliana] | 190 | 2e-013 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q8GZ42 | Histone-lysine N-methyltransferase ATX5 | 270 | 7e-024 |
| Q9SUE7 | Histone-lysine N-methyltransferase ATX4 | 253 | 6e-022 |
| Q9M364 | Histone-lysine N-methyltransferase ATX3 | 159 | 5e-011 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7QEQ4 | Chromosome chr16 scaffold_86, whole genome shotgun sequence | 338 | 1e-030 |
| B9I5A8 | SET domain protein (Fragment) | 327 | 2e-029 |
| B9IDS5 | SET domain protein (Fragment) | 323 | 7e-029 |
| B9RII0 | Trithorax, putative | 304 | 1e-026 |
| A7PZX4 | Chromosome chr15 scaffold_40, whole genome shotgun sequence | 271 | 8e-023 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT5G53430.1 | SDG29 (SET DOMAIN GROUP 29); DNA binding / protein binding / zinc ion binding | 270 | 6e-025 |
| AT4G27910.1 | SDG16 (SET DOMAIN PROTEIN 16); protein binding / zinc ion binding | 253 | 5e-023 |
| AT3G61740.1 | SDG14 (SET DOMAIN PROTEIN 14); DNA binding / protein binding / zinc ion binding | 190 | 1e-015 |
| AT3G61740.2 | SDG14 (SET DOMAIN PROTEIN 14); DNA binding / protein binding / zinc ion binding | 190 | 1e-015 |
| AT3G61723.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: SDG14 (SET DOMAIN PROTEIN 14); DNA binding / protein binding / zinc ion binding (TAIR:AT3G61740.2); Has 20 Blast hits to 20 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 116 | 4e-007 |
|
|