RU13966 sequence (245 bp)


Member Information
CCAGAAAATTAGACCTTAGTTTTCCAACATAAGTAGTGCTTGCTCGAGAGAAATCATCTGCAGCCAAGGATATCACAAACTC
TGTACTTGTTGCCCGTCTAATTTTCCTGGCTGTCAACAGTAGCTTAGTCATGTCCCCGGAGAGAGCAGGGCTTAGACCAAGA
AACAGGCGATATGTGGAAGTTTCTCTTTCCCTCTGAATAAAGCACTGGATCAGAGAATCTCTCGGCCCGGGCTAGAAGAAG


RU13966 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
11002

Probe ID Probe Sequeces
yueji_12511ATATGTGGAAGTTTCTCTTTCCCTCTGAATAAAGCACTGGATCAGAGAATCTCTCGGCCC bl2seq


RU13966 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
CAO61143 unnamed protein product [Vitis vinifera] 319 2e-028
NP_175160 AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] 297 8e-026
AAG52638 unknown protein; 3155-1759 [Arabidopsis thaliana] 297 8e-026
ACF86942 unknown [Zea mays] 275 3e-023
NP_001047866 Os02g0705300 [Oryza sativa (japonica cultivar-group)] 271 8e-023

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q0WPY0 Tubby-like F-box protein 6 297 5e-027
Q6Z2G9 Tubby-like F-box protein 5 271 5e-024
Q8GVE5 Tubby-like F-box protein 2 247 3e-021
Q944S3 Tubby-like F-box protein 5 245 5e-021
Q75HX5 Tubby-like F-box protein 8 243 9e-021

TrEMBL top hits
Blast detail
Accession No. Description Score e value
A7NTB0 Chromosome chr18 scaffold_1, whole genome shotgun sequence 319 2e-028
B9GRM5 F-box family protein 295 1e-025
B9R7W3 Phosphoric diester hydrolase, putative 294 2e-025
B9H4C5 F-box family protein 293 2e-025
A7PUT3 Chromosome chr4 scaffold_32, whole genome shotgun sequence 283 3e-024

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G47270.1 AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor 297 4e-028
AT2G18280.1 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor 247 3e-022
AT2G18280.2 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor 247 3e-022
AT1G43640.1 AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor 245 4e-022
AT2G47900.1 AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor 241 1e-021