RU15319 sequence (719 bp)


Member Information
GACACACAGATGCACACTCTACTTACAAATTTCTCTCTCTCCTTCCATCCCTACGCTCACTCATTTTTCTCTCTGACTCTGA
CAAACTATGGTACACTCNCCAAAGTTCAGAGGTGTCAGGCAACGCCACTGGGGCTCCTGGGTTTCTGAGGTTCGTCATCCAT
TACTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGAGTGCAGAAGAGGCAGCACGAGCCTACGACGAGGCTGCGATTCTGAT
GAGCGGTCGAAATGCCAAAACAAACTTTCCAGTCACTACAAATGAAATTGCAGCTGCTAGTAAGGATCCTATCAACAAGAGC
AACTCCAGTAGTCCTTCTTCACTTCCTGGCAGTCCTCAGCGCCAAGCTTCGCAAGTGTTGCAAGTCTCCCTCTCCTTCCCTC
ACTTGCCTCAGGCTCGACACTGAGAATTCTCATATTGGCGTTTGGCAAAAGCGTGCCGGGCCACGTTCAGATTCGAATTGGT
TGATGATGGTGGAACTGGGACAGAAGAGTGATTTAAAAGAGGAGAAGGAGGAGGGTACTAGCGCCCCTGAATTGCCCGATGG
ACACGAAACGGAAGGAGTACACGGTGGGGGTGATAGATTGCACGAGGAGGAAAGGATTGCATTGCAGATGATAGAGGAACTT
CTCAATAGAAATTAATCACTTGGTATTTATTTTTTGCGGTTCCGACGGATGATACGGAATGAA


RU15319 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01012

Probe ID Probe Sequeces
yueji_06294CAATAGAAATTAATCACTTGGTATTTATTTTTTGCGGTTCCGACGGATGATACGGAATGA bl2seq


RU15319 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_172988 SHN1/WIN1 (SHINE1); DNA binding / transcription factor [Arabidopsis thaliana] 332 2e-029
ACG32529 unknown [Zea mays] 331 3e-029
ABB55256 AP2 transcription factor [Brassica juncea] 330 4e-029
ABD28728 Pathogenesis-related transcriptional factor and ERF [Medicago truncatula] 329 5e-029
AAM62938 putative ethylene responsive element [Arabidopsis thaliana] 325 1e-028

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9XI33 Ethylene-responsive transcription factor WIN1 307 1e-027
Q9LFN7 Ethylene-responsive transcription factor SHINE 2 244 3e-020
Q3E958 Ethylene-responsive transcription factor SHINE 3 236 2e-019
Q94AW5 Ethylene-responsive transcription factor ERF003 205 1e-015
P16146 Protein PPLZ02 179 1e-012

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7QIP9 Chromosome chr9 scaffold_104, whole genome shotgun sequence 316 2e-027
A1X3G8 AP2 transcription factor 306 2e-026
B9RV55 DNA binding protein, putative 306 2e-026
B9SET1 DNA binding protein, putative 305 3e-026
A1X3G9 AP2 transcription factor 293 7e-025

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G15360.1 SHN1 (SHINE 1); DNA binding / sequence-specific DNA binding / transcription factor 308 1e-028
AT5G11190.1 SHN3 (shine3); DNA binding / transcription factor 244 3e-021
AT5G25390.2 SHN2 (shine2); DNA binding / transcription factor 236 3e-020
AT5G25190.1 ethylene-responsive element-binding protein, putative 205 1e-016
AT5G25390.1 SHN2 (shine2); DNA binding / transcription factor 191 4e-015