RU17037 sequence (854 bp)


Member Information
TGATGAGTTTGAATCAGAGTCAGAAGAAGAGGAGGAAGAACTCCCAATGATTGCTGCAGAGAATGGAAAAGTTGAAAATGCA
AAACCAGCTATAGCCAAGAGCAATGCTGTCAAACCTGAATCTTCTGGAAAGCAAAAGGTTAAGATTGAAGAACCAATCAAAG
TTGTGGCTGATGAAGATGATTCTGCTTCTGACATGGATGACTCAGATGACTTATTGGATGAAGATGACTCATCAGATGATGA
TGATGATGAAAGTGAGGATGATTCTGATGAGGAAGATGAAGAGACACCTACTCCTAAGAAGCCTGAATCTAAGAAAAGAGCC
CAGGTCTCTGGATCAGTCAAAACTCCAGTTTCTGCTAAGAAGGCAAAGATAGTCACCAGTACTCCTCAGAAGACTGATGGTA
AGAAGGGCGGCCACACAGATACTCCACACCCTGCGAAGAAGGGGAAGACTCCTGCTACTGATAAATCCAAGACACAAACTCC
AAAATCTGCTGGTGGCAATTTCTCCTGCGGTTCCTGCAGCAAGTCATTTGGTTCAGATGGTGCTCTTCAGTCTCACAACAAG
GCTAAGCATAGTGCTGGAAAGTAGAATGGAAATGTGGCTGAAGCGCAGCTTGTTTTGATATATAGTAATTTTGGGAATCGAG
AGTACAGGTTGAAGGGTTTTGGCATTCGCGGATTGCCCTCGGGATTTATTTATCGCCTTGTTTTGCTCGACATTTAACTGGA
TGGTTTAGTGTGATACTTTGGATTGTTTCTCTTAATTATTAAGTAGGCGTTATATTTAAATCCCCATTTCTTTTTATCATTA
TTCTACTTTTAATTGGAATTTTTAGTCTACTTTG


RU17037 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
21014

Probe ID Probe Sequeces
yueji_13430TTCTGCTAAGAAGGCAAAGATAGTCACCAGTACTCCTCAGAAGACTGATGGTAAGAAGGG bl2seq


RU17037 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
AAF70196 putative histone deacetylase HD2 [Oryza sativa] 440 9e-042
AAU10714 putative histone deacetylase HD2 [Oryza sativa (japonica cultivar-group)] 439 1e-041
NP_001056523 Os05g0597100 [Oryza sativa (japonica cultivar-group)] 439 1e-041
EAY99285 hypothetical protein OsI_020518 [Oryza sativa (indica cultivar-group)] 436 3e-041
EAZ35507 hypothetical protein OsJ_018990 [Oryza sativa (japonica cultivar-group)] 436 3e-041

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9M4U5 Histone deacetylase HDT2 213 2e-016
Q9M4U4 Histone deacetylase HDT3 199 6e-015
O24591 Histone deacetylase HDT1 191 5e-014
Q8LJS2 Histone deacetylase HDT1 182 6e-013
Q9LZR5 Histone deacetylase HDT3 173 7e-012

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B8AXI7 Putative uncharacterized protein 227 4e-017
B9SN80 Histone deacetylase 2a, putative 227 4e-017
Q0DFD6 Os05g0597100 protein 227 4e-017
Q5KQG2 Putative histone deacetylase HD2 227 4e-017
Q688F7 Putative histone deacetylase HD2 227 4e-017

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase 174 5e-013
AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding 173 7e-013
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase 162 1e-011
AT3G44750.1 HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding 118 2e-006