Rose Transcriptome Database
RU19896 sequence (1015 bp)
GGGCATTGCCTTCAGAATCATATGAAAAGTGAAATGGAATCATCATCGGCTTCGAATCAAGGCGAGTTCGATTACTTGTTCA
AGCTGTTGATGATCGGCGACTCCGGCGTCGGCAAGAGCAGTCTTCTCCTCAGCTTCACTTCCGACTCCTTCGAAGACCTCTC
TCCTACCATCGGTGTTGATTTCAAGGTCAAGTATGTTAATGTCGGCGGCAAGAAGCTCAAGCTTGCAATTTGGGATACAGCT
GGTCAAGAGAGATTTAGAACCTTGACGAGTTCATATTACAGAGGAGCGCAAGGGATAATTATGGTTTATGATGTAACAAGGC
GAGAAACATTTACAAACCTTTGCGATATATGGGCCAAGGAAATAGAACTCTATTCAACAAATCAAGACTGCATCAAGATGCT
TGTGGGAAACAAAGTCGATAAGGAGAGTGACAGGGTTGTAACCAAAAAAGAGGGAATAAATTTTGCTAGGGAATCTGGATGT
CTCTTTATTGAATGCAGTGCTAAAACTCGAGTTAACGTCCAGCAGTGCTTTGAAGAGCTTGTTTTAAAGATTCTGGATACTC
CTAGTCTGTTAGCCGAGGGTTCTAAAGGGTTGAAAAAGAACATATTTAAGGAGAAACCACAGTCCAGTGCAGCCGCAAGCAG
CTGTTACTGAAGCCGAAAAGTTTATCAAACTTTTGGCATTTCAAATCTCTCTAACTAGCAGTAAACGGTTACTTCGAATTCT
CAACGAATTATTGCCATTGTATTTTTGTTTTACAAGGACTGCAAATTACTTGTAAAATATAATTATGTGATTTATGCCTTTT
ATGTTGAGTTTTCTTTTGGACTGATCTGGTATGTACAAACATAATGACATTTAATATGCTGTCCAGCCCTGGAAGAATTACT
GATGTAATACAACACATTCAAGCTGATTTATTCTTGCATTGTACAAAATACGGTTTTTAAGTACTTAATGCTTTCCTAAGCT
TGAATATATATATATACACCTCTATTGCTGT
|
RU19896 Expression
| Control | Ethylene | WDS | GenBank | Total |
|---|
| 4 | 1 | 1 | 2 | 8 |
| Probe ID |
Probe Sequeces |
| yueji_02956 | CCCTGGAAGAATTACTGATGTAATACAACACATTCAAGCTGATTTATTCTTGCATTGTAC bl2seq |
RU19896 Annotation
| Accession No. |
Description |
Score |
e value |
| CAA98164 |
RAB1Y [Lotus japonicus] |
937 |
3e-099 |
| ACG34792 |
unknown [Zea mays] |
931 |
1e-098 |
| CAO60918 |
unnamed protein product [Vitis vinifera] |
930 |
2e-098 |
| NP_175056 |
ATRAB18 (Arabidopsis Rab GTPase homolog C1); GTP binding [Arabidopsis thaliana] |
894 |
3e-094 |
| ABK21996 |
unknown [Picea sitchensis] |
827 |
2e-086 |
| Accession No. |
Description |
Score |
e value |
| P36862 |
GTP-binding protein yptV3 |
515 |
2e-051 |
| Q5ZLG1 |
Ras-related protein Rab-18 |
476 |
6e-047 |
| Q6DHC1 |
Ras-related protein Rab-18-B |
472 |
2e-046 |
| Q0IIG8 |
Ras-related protein Rab-18 |
468 |
5e-046 |
| Q9NP72 |
Ras-related protein Rab-18 |
468 |
5e-046 |
| Accession No. |
Description |
Score |
e value |
| B9H489 |
Predicted protein |
856 |
7e-090 |
| B9HES5 |
Predicted protein |
856 |
7e-090 |
| Q40207 |
RAB1Y (Fragment) |
847 |
7e-089 |
| A7NSN5 |
Chromosome chr18 scaffold_1, whole genome shotgun sequence |
846 |
1e-088 |
| B6TCF9 |
Putative uncharacterized protein |
835 |
2e-087 |
| Accession No. |
Description |
Score |
e value |
| AT1G43890.1 |
ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
811 |
9e-087 |
| AT1G43890.2 |
ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
811 |
9e-087 |
| AT1G43890.3 |
ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
811 |
9e-087 |
| AT5G03530.1 |
RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding |
713 |
2e-075 |
| AT3G09910.1 |
ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding / transcription factor binding |
647 |
9e-068 |