RU20245 sequence (993 bp)


Member Information
GACAGTCGAAACAGAGAGAGGGAGAAAGAGACCGAGAGAGAGAGAGTGGTGATTTCATTTTGCTGTGAGGGGAAAGAAGATC
TGTATTCAGATCGGTGGAGAGAAAGCATTTTGTATCGAAGGTAACCTAAGGGACGTGAGAGTTTAAGCGAACACCCCCTGAA
AAACTAGAACAGTCGGATCGGAGGCATCGCTAGCTCTGAAGAAGAAGAAGAGCAATGGCAACGACGGCATGTTTCATTATCG
TGAGCAGAAACGACATCCCCATTTACGAAGCTGAAGTGGGATCTGCGGCCAAGAGAGAAGATGCTGCTCAGCTTCACCAGTT
CATATTACATGCAGCTCTGGATATTGTTCAGGACCTTGCTTGGACTACCAGTGCCATGTATTTGAAAGCAGTAGACCGTTTT
AATGATTTGGTGGTTTCCGCTTATGTTACAGCTGGTCATACACGACTTATGCTGCTTCATGACTCCCGGAATGATGACGGGA
TTAAGAGCTTTTTCCAAGAGGTTCATGAGCTTTATATCAAGACTCTTCTTAATCCGACCTACTTGCCTGGTTCACGAATAAC
ATCATCACATTTTGATACCAAAGTTCGTGCCCTTGCACGAAAGTATCTGTAGGGCTCATGCATCTTGCAAGTGGACAACCTC
TTGATTTTATTTCAGAGTGAGGTCGAAGTTTCCAATACAGGGTATTCGAAAGTCTTTTCCCCAGATTTGTCCTTCTCAGGAT
TTTTCCTCATGATTGTCACTTGTAAACTATTGATGGTATAAAGATCTTTAGTTCCCCATATTTAGGGTGCTTGTGTATTACA
AACCTTTTGCGTATTGTGTTCATACAAATATCCTCACGGATTGATGATTATTCTGAAGTGGTGCTGCATATATTTGTTATAA
CCAATAAGGTTAAATGCAAGGGGATTTAATTGAAACTAATTACTACTTGAGAGTTAAATATCAATTGTAGAGAACATATCCC
AAACAAAAA


RU20245 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
35019

Probe ID Probe Sequeces


RU20245 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_178165 unknown protein [Arabidopsis thaliana] 650 5e-066
ABL97982 putative TRAPP subunit [Brassica rapa] 645 2e-065
ACF84417 unknown [Zea mays] 603 1e-060
NP_001047420 Os02g0613600 [Oryza sativa (japonica cultivar-group)] 599 4e-060
CAE05549 OSJNBb0116K07.2 [Oryza sativa (japonica cultivar-group)] 594 2e-059

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q3T0F2 Trafficking protein particle complex subunit 2 352 1e-032
O14582 Trafficking protein particle complex subunit 2 351 2e-032
Q9CQP2 Trafficking protein particle complex subunit 2 351 2e-032
Q5RES6 Trafficking protein particle complex subunit 2 351 2e-032
Q54RV6 Trafficking protein particle complex subunit 2 327 1e-029

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9GVL8 Predicted protein 658 6e-067
B9N9X3 Predicted protein 654 2e-066
A1YMX6 Putative TRAPP subunit 645 2e-065
B4FQM4 Putative uncharacterized protein 603 1e-060
B8AFE8 Putative uncharacterized protein 599 4e-060

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G80500.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20930.1); Has 437 Blast hits to 435 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 248; Fungi - 75; Plants - 53; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). 651 3e-068