RU20460 sequence (495 bp)


Member Information
GCACGAGGAGAACTAGTCTCGCTTCTTCTTCTTCTTCTCCTCCTCTCTCTGAGATTCTTCTGAGAGGCTCTCTGTCTGCGAT
ATGGAGTTGTTCTACTTTCTTCTGTTTGGTGCTCTCTCGGCGGTGGTGGCAGCTTTGGAGCTGAGCAAGAGGAACAAGGATC
GCATTAGTACCTCCTCTGTTTTCACTGCCTTCAAGAACAACTATCTCCTCATCTATTCTCTTATGATGGCTGGGGATTGGTT
GCAGGGTCCATATGTTTACTACCTCTACAGCACATATGGATTTTCAAAGGGGGATATTGGACAACTCTTTATTGCTGGGTTT
GGGTCGTCTATGTTGTTCGGAACAGTTGTAGGGTCACTAGCTGACAAACAGGGTCGGAAGAGGGCATGTGTTACATACTGCA
TAACTTACATCCTAAGTTGCTTCACCAAGCATTTTCCTGACTACAAAGTTTTAATGTTGGGACGCGTGCTGGGAGGCATTGC
AAC


RU20460 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
30025

Probe ID Probe Sequeces


RU20460 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_567786 unknown protein [Arabidopsis thaliana] 639 2e-065
CAB38284 putative protein [Arabidopsis thaliana] 639 2e-065
CAO62932 unnamed protein product [Vitis vinifera] 635 6e-065
CAO48607 unnamed protein product [Vitis vinifera] 629 3e-064
NP_190500 unknown protein [Arabidopsis thaliana] 627 5e-064

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q921Y4 Major facilitator superfamily domain-containing protein 5 263 9e-023
Q6N075 Major facilitator superfamily domain-containing protein 5 259 2e-022
Q0VC03 Major facilitator superfamily domain-containing protein 5 255 7e-022
Q5R542 Major facilitator superfamily domain-containing protein 5 251 2e-021
Q6DG19 Major facilitator superfamily domain-containing protein 5 235 2e-019

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
Q9C5R0 AT4g27720/T29A15_210 594 3e-060
Q9T094 Putative uncharacterized protein AT4g27720 594 3e-060
A7QJ77 Chromosome chr2 scaffold_105, whole genome shotgun sequence 586 3e-059
B9RYS6 Putative uncharacterized protein 585 4e-059
B8LMA4 Putative uncharacterized protein 580 1e-058

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G27720.1 LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64650.1); Has 496 Blast hits to 491 proteins in 183 species: Archae - 5; Bacteria - 234; Metazoa - 75; Fungi - 33; Plants - 96; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). 594 4e-062
AT3G49310.1 LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 550 Blast hits to 545 proteins in 201 species: Archae - 5; Bacteria - 285; Metazoa - 85; Fungi - 33; Plants - 99; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). 580 2e-060
AT1G64650.1 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 565 Blast hits to 562 proteins in 197 species: Archae - 7; Bacteria - 312; Metazoa - 76; Fungi - 39; Plants - 85; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). 579 2e-060
AT1G64650.2 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 548 Blast hits to 545 proteins in 182 species: Archae - 5; Bacteria - 298; Metazoa - 76; Fungi - 38; Plants - 85; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). 427 9e-043