RU20607 sequence (274 bp)


Member Information
ATCAAGAAACCCTACTGCTGCTTGAGGCCATGGAAATCTATAATGAGAACTGGAATGAAATTGCAGAGCATGTTGGTACAAA
GTCAAAAGCGCAATGCATACTTCATTTTCTACGTTTGCCTGTGGAGGATGGCCTGCTGGAAAATATTGAAGTTCCAAAGATG
CCTCTGTCATCCAACTCGTCAGATAGAGATGATCATGGCGGATTTTATTCAACTTCAAATGGGAATTCAGCAGGATCCTGCC
TACAAGATGGTGATTCTGAAAGCAGGTT


RU20607 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
15006

Probe ID Probe Sequeces
yueji_02923TTCAACTTCAAATGGGAATTCAGCAGGATCCTGCCTACAAGATGGTGATTCTGAAAGCAG bl2seq


RU20607 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
CAO61898 unnamed protein product [Vitis vinifera] 343 3e-031
NP_173589 ATSWI3C (Arabidopsis thaliana switching protein 3C); DNA binding 266 3e-022
EAY80193 hypothetical protein OsI_034152 [Oryza sativa (indica cultivar-group)] 249 3e-020
NP_001065911 Os11g0183700 [Oryza sativa (japonica cultivar-group)] 244 1e-019
ABG22394 SWIRM domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] 244 1e-019

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q9XI07 SWI/SNF complex subunit SWI3C 266 2e-023
Q8VY05 SWI/SNF complex subunit SWI3D 216 1e-017
Q92922 SWI/SNF complex subunit SMARCC1 191 9e-015
P97496 SWI/SNF complex subunit SMARCC1 191 9e-015
Q8TAQ2 SWI/SNF complex subunit SMARCC2 189 2e-014

TrEMBL top hits
Blast detail
Accession No. Description Score e value
A7NVG5 Chromosome chr18 scaffold_1, whole genome shotgun sequence 343 3e-031
B9H7H8 Chromatin remodeling complex subunit 336 2e-030
B8BJG9 Putative uncharacterized protein 249 3e-020
C0PKZ5 Putative uncharacterized protein 248 3e-020
B9G9R2 Putative uncharacterized protein 244 1e-019

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G21700.1 ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C); DNA binding 266 2e-024
AT4G34430.1 CHB3; DNA binding / transcription factor/ zinc ion binding 216 1e-018
AT4G34430.4 CHB3; DNA binding / transcription factor/ zinc ion binding 216 1e-018
AT4G34430.3 CHB3; DNA binding / transcription factor/ zinc ion binding 216 1e-018
AT4G34430.2 CHB3; DNA binding / transcription factor/ zinc ion binding 216 1e-018