RU20805 sequence (344 bp)


Member Information
GATTCAGTTCCTTGCAAAATCCGTGCTAAGCGTGGCTGTGCAACTCATCCCAGAAGCATTGCTGAGAGGGAGAGAAGAACTA
GAATAAGTGGGAAGTTAAAGAAACTGCAAGACCTTGTCCCTAACATGGATAAGCAAACAAGCTATGCAGACATGTTGGATTT
GGCTGTGCAACATATCAAGGGTCTACAAAATCAAGTCCAGAATCTTCACAAAGATCTTGAAGGTTGCACTTGCGGCTGCAAA
CCCACATAACATTACCTGATGATAGTGAAGAAAATAAGGGAACTACAGAGGCCCAAAATTAAAAGGGGTCGAAGTTAGACTA
GTTTTGTTGCATTACC


RU20805 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
50005

Probe ID Probe Sequeces
yueji_14786AAGGGAACTACAGAGGCCCAAAATTAAAAGGGGTCGAAGTTAGACTAGTTTTGTTGCATT bl2seq


RU20805 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO67768 unnamed protein product [Vitis vinifera] 409 7e-039
NP_563749 basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] 399 1e-037
AAM63313 Contains similarity to bHLH transcription factor GBOF-1 from Tulipa gesneriana gb|AF185269 [Arabidopsis thaliana] 399 1e-037
CAE01659 OSJNBa0084K20.3 [Oryza sativa (japonica cultivar-group)] 334 3e-030
NP_001053158 Os04g0489600 [Oryza sativa (japonica cultivar-group)] 334 3e-030

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q8H102 Transcription factor bHLH128 399 7e-039
Q9ZW81 Transcription factor bHLH129 315 4e-029
Q9C690 Transcription factor bHLH122 296 6e-027
Q66GR3 Transcription factor bHLH130 290 3e-026
Q9C8P8 Transcription factor bHLH80 288 5e-026

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9SN18 DNA binding protein, putative 420 4e-040
A7QS45 Chromosome chr5 scaffold_156, whole genome shotgun sequence 409 7e-039
B9IAD1 Predicted protein 406 1e-038
B9GU85 Predicted protein (Fragment) 393 5e-037
B8AVU6 Putative uncharacterized protein 334 3e-030

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G05805.1 basic helix-loop-helix (bHLH) family protein 400 4e-040
AT2G43140.1 DNA binding / transcription factor 315 3e-030
AT1G51140.1 basic helix-loop-helix (bHLH) family protein 296 5e-028
AT2G42280.1 basic helix-loop-helix (bHLH) family protein 290 2e-027
AT1G35460.1 basic helix-loop-helix (bHLH) family protein 288 4e-027