RU22158 sequence (413 bp)


Member Information
TGAAATGCGCTTTCTCCAAATGGAACATGATGTCTAGTTCACACACATTGCCGAAATGGCGGTCCATAGTTTCAACTAACAG
ATGTATGAATTCCAAGATTGCAAGCTCATTTTCATCATTGTCTACTCCAACCAGGAAAAACAGTGAAGCATAGCGTCTGTAG
ACAATTTTGTAATTCCGGTGCTCGACAAATGAACACTGTTGCTCGTTGCGGGCGAGGCATTTGCGGACGATTTCAGCTTCAA
GAGCTCGCCTTTCTTCGAGGGTGAGATATTCGTAGTATTGGGCAAGACGAGTCTGCCCTTGTTTGTTCACCATCAATATGAA
TCTGATCCCCATTCTTCTTCTTCTTCTCTCTCTCCCCGCTCCTCTGCTCTTTCTCTTCCTTCTTTTGTTTTGTTTTCGTTTC
TGC


RU22158 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
04004

Probe ID Probe Sequeces
yueji_04055TCTTGCCCAATACTACGAATATCTCACCCTCGAAGAAAGGCGAGCTCTTGAAGCTGAAAT bl2seq


RU22158 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
NP_179569 clathrin adaptor complex small chain family protein [Arabidopsis thaliana] 566 4e-057
CAO65419 unnamed protein product [Vitis vinifera] 566 4e-057
BAD05209 putative clathrin coat assembly protein AP17 [Oryza sativa Japonica Group] 546 8e-055
NP_001064450 Os10g0368400 [Oryza sativa (japonica cultivar-group)] 543 2e-054
ACF85502 unknown [Zea mays] 539 5e-054

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9Y587 AP-4 complex subunit sigma-1 302 1e-027
Q3ZBB6 AP-4 complex subunit sigma-1 300 2e-027
Q9WVL1 AP-4 complex subunit sigma-1 294 9e-027
Q54NZ4 AP-4 complex subunit sigma 288 4e-026
Q9P7N2 AP-1 complex subunit sigma-1 273 2e-024

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9RKE4 AP-4 complex subunit sigma-1, putative 469 7e-046
B9H8U9 Predicted protein 468 9e-046
A7PEE2 Chromosome chr11 scaffold_13, whole genome shotgun sequence 459 1e-044
O82201 Putative clathrin assembly protein 459 1e-044
B8BAI0 Putative uncharacterized protein 449 1e-043

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT2G19790.1 clathrin adaptor complex small chain family protein 459 1e-046
AT4G35410.2 clathrin adaptor complex small chain family protein 250 2e-022
AT2G17380.1 AP19; protein binding / protein transporter 245 8e-022
AT4G35410.1 clathrin adaptor complex small chain family protein 241 2e-021
AT1G47830.1 clathrin coat assembly protein, putative 237 7e-021