Rose Transcriptome Database
RU22209 sequence (738 bp)
ACTACTAGCATCCGAAAGGGAAGCGACGCGTTGTTTTTTCAAAGGGGGACCTTGGTTTGCAGTATCTCCATTCTGCTCACTG
TCATTTATCTGCTCATGGCTCTGACTCTTGGTTTTGATAGTCTCTTGACACTCAGATGAAGATAACTGACCTTGTTTTGAAC
CGCTCAAGTTGCCACTAAAGCCACTATGGTTACCTTTTCTGTGACCAGAACCCAACACAACCTCCCCAAAAGGCAAATCAAT
AAGCTTAGCAATACAATCAACTTTGGTCTTGGTCTTAACATTTTGAGCAACACAATCCCAATCATCTCCATGCTTTGCAACT
GAATCTAAAAGAAGTAAAGTTTCTGATTCAGTCCACTCAACTCCCATATTACTACTCTTTTCAACTGGCTCGTTGTACTTGA
AATTTTCCTTCAATTTGTTCTCCCCATGGTTTCCATTTTCAAAACACTTTGTGCAAAGTAGAAAATCACCCTTGTTATACTT
GTAGTGTCCAGAATCACAATGTCCGCCACAATTGCCACAAACCAAGCTCTCTTTCTTCAAATCACCAAAAACATTCGAGTAT
GATGCCAATGGAGGCAATTAATTCTACTCGCACTTCCACCCCCACTGTCCACTACCGTAGGTGTGGCCGAAAGGGGCTTAGA
ATCACTTGGATTTGCACCCACTCGGACCGCATTTGGGACTCCTTCCTCAACCTTAACCGTAGTCCCGGCCTCACCCGAGGTA
|
RU22209 Expression
| Control | Ethylene | WDS | GenBank | Total |
|---|
| 2 | 4 | 1 | 0 | 7 |
| Probe ID |
Probe Sequeces |
| yueji_09143 | AAACATTCGAGTATGATGCCAATGGAGGCAATTAATTCTACTCGCACTTCCACCCCCACT bl2seq |
| yueji_11669 | GTAAAGTTTCTGATTCAGTCCACTCAACTCCCATATTACTACTCTTTTCAACTGGCTCGT bl2seq |
RU22209 Annotation
| Accession No. |
Description |
Score |
e value |
| CAN80839 |
hypothetical protein [Vitis vinifera] |
601 |
2e-060 |
| CAO68328 |
unnamed protein product [Vitis vinifera] |
601 |
2e-060 |
| NP_850476 |
ATSWI3A (Arabidopsis thaliana switching protein 3A); DNA binding |
399 |
4e-037 |
| AAM14849 |
putative SWI/SNF family transcription activator [Arabidopsis thaliana] |
399 |
4e-037 |
| CAE05892 |
OSJNBa0044K18.33 [Oryza sativa (japonica cultivar-group)] |
316 |
2e-027 |
| Accession No. |
Description |
Score |
e value |
| Q8W475 |
SWI/SNF complex subunit SWI3A |
383 |
2e-036 |
| Q84JG2 |
SWI/SNF complex subunit SWI3B |
183 |
4e-013 |
| Q8VY05 |
SWI/SNF complex subunit SWI3D |
180 |
8e-013 |
| O14470 |
SWI/SNF and RSC complexes subunit ssr2 |
151 |
2e-009 |
| Q9XI07 |
SWI/SNF complex subunit SWI3C |
144 |
1e-008 |
| Accession No. |
Description |
Score |
e value |
| A5B661 |
Putative uncharacterized protein |
587 |
6e-059 |
| A7PHK4 |
Chromosome chr17 scaffold_16, whole genome shotgun sequence |
587 |
6e-059 |
| B9IFF6 |
Chromatin remodeling complex subunit |
573 |
3e-057 |
| B9RAB3 |
DNA binding protein, putative |
472 |
1e-045 |
| Q01K41 |
OSIGBa0158F13.6 protein |
310 |
8e-027 |
| Accession No. |
Description |
Score |
e value |
| AT2G47620.1 |
ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A); DNA binding |
383 |
2e-037 |
| AT2G33610.1 |
ATSWI3B (SWITCH SUBUNIT 3); DNA binding |
183 |
4e-014 |
| AT4G34430.1 |
CHB3; DNA binding / transcription factor/ zinc ion binding |
180 |
8e-014 |
| AT4G34430.4 |
CHB3; DNA binding / transcription factor/ zinc ion binding |
180 |
8e-014 |
| AT4G34430.3 |
CHB3; DNA binding / transcription factor/ zinc ion binding |
180 |
8e-014 |