RU22415 sequence (216 bp)


Member Information
TTTTTAGAGAGAGAGAGAGAGACAAAGTGTGGGAGATATGAAGATACAGTGTAACGTGTGCGAGACGGCGGAGGCGAACGTG
CTCTGCTGCGCCGACGAGGCGGCGCTCTGCTGGGCCTGCGACGAGAAGGTCCACGCCGCCAACAAGCTCGCCAGCAAGCACC
AGAGGGTTCCTCTCTCCGCCTCCCACATCGCCCAAGTGCGATATCTGCCAGG


RU22415 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
20002

Probe ID Probe Sequeces
yueji_08377TTAGAGAGAGAGAGAGAGACAAAGTGGTGGGAGATATGAAGATACAGTGTAACGTGTGCG bl2seq


RU22415 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO39479 unnamed protein product [Vitis vinifera] 262 9e-022
NP_565183 zinc finger (B-box type) family protein [Arabidopsis thaliana] 255 6e-021
AAD30576 Highly similar to rice zinc finger protein [Arabidopsis thaliana] 255 6e-021
NP_001056834 Os06g0152200 [Oryza sativa (japonica cultivar-group)] 216 2e-016
NP_001131712 hypothetical protein LOC100193074 [Zea mays] 215 3e-016

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9SYM2 Putative salt tolerance-like protein At1g78600 255 4e-022
Q96288 Salt tolerance protein 191 1e-014
Q9SID1 Salt tolerance-like protein 188 2e-014
Q9LQZ7 Putative salt tolerance-like protein At1g75540 162 2e-011
Q9FHH8 Zinc finger protein CONSTANS-LIKE 5 143 4e-009

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7P279 Chromosome chr19 scaffold_4, whole genome shotgun sequence 262 9e-022
B9SEX4 Zinc finger protein, putative 258 3e-021
B9I1Q4 Predicted protein 251 2e-020
A2Y9G2 Putative uncharacterized protein 216 2e-016
O82116 Os06g0152200 protein 216 2e-016

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G78600.1 LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1); transcription factor/ zinc ion binding 255 3e-023
AT1G06040.2 STO (SALT TOLERANCE); DNA binding / protein binding / transcription factor/ zinc ion binding 191 8e-016
AT1G06040.1 STO (SALT TOLERANCE); DNA binding / protein binding / transcription factor/ zinc ion binding 191 8e-016
AT2G31380.1 STH; protein domain specific binding / transcription factor/ zinc ion binding 188 2e-015
AT4G10240.1 zinc finger (B-box type) family protein 176 5e-014