Member Information |
| TTTTTTTTTGAATTCCGAAGACCGACTTAGGAATCTAATGATTCCAAATCCACATCACATCAATTTTAATAAGTTACTGACA TAGAAAGACCAGCAAACTCGAAATAGAGAACAAAAGTCTTATACAGACTAAAATCCTAACGCCTCATAAACCTAGTTGATAG AACCCAGTCGGTCTTTCATAACATAATATATTCAAAGCTGTGCAGCTCCTCCAGTCTGGTGCAACATAGCATCTATCTCATC CCCATCTTCCATTTCAAGCTCATCAGGGGTAAAATATACTCGCAGACGACGGCCGTCAAACAGGAAGGCAATGGAGTTGAGC TCAACAGATTGGCGATCACAGTAGGCATTCATCAGCTTCTTGAGTTGAGTGCTTCTTTTGATCCTAAAGAAGACTTGGTTCC CATCCTGCCCTTTCACTTTGAGGTTGATGTGAGCACCCTGATCGTTGGGCTTCTTGTCCTCCTCCGGGGGCAGACTCGCAAC TCCTGACATCGTCTCTCTTCTTCTTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAAAATAAAAGTTAGGGTTCTCTG CTTCC |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 1 | 0 | 0 | 1 | 2 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO24058 | unnamed protein product [Vitis vinifera] | 429 | 8e-041 |
| CAO17174 | unnamed protein product [Vitis vinifera] | 425 | 2e-040 |
| CAN71030 | hypothetical protein [Vitis vinifera] | 422 | 5e-040 |
| CAN79327 | hypothetical protein [Vitis vinifera] | 421 | 7e-040 |
| CAA67923 | ubiquitin-like protein [Arabidopsis thaliana] | 420 | 9e-040 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| P55852 | Ubiquitin-like protein SMT3 | 416 | 2e-040 |
| P55857 | Ubiquitin-like protein SMT3 | 391 | 2e-037 |
| O13351 | Ubiquitin-like protein pmt3/smt3 | 259 | 4e-022 |
| Q9Z172 | Small ubiquitin-related modifier 3 | 232 | 5e-019 |
| Q5XIF4 | Small ubiquitin-related modifier 3 | 231 | 6e-019 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9IAK0 | Predicted protein | 447 | 6e-043 |
| B9GTT9 | Predicted protein | 444 | 1e-042 |
| B9GTT8 | Predicted protein | 438 | 7e-042 |
| A7PX89 | Chromosome chr12 scaffold_36, whole genome shotgun sequence | 429 | 7e-041 |
| A7QZ01 | Chromosome undetermined scaffold_260, whole genome shotgun sequence | 425 | 2e-040 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT5G55160.1 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | 425 | 2e-042 |
| AT4G26840.1 | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag | 416 | 2e-041 |
| AT5G55160.2 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | 327 | 5e-031 |
| AT5G55170.1 | SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag | 238 | 1e-020 |
| AT5G55856.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag (TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124; Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink). | 228 | 2e-019 |
|
|