RU22986 sequence (669 bp)


Member Information
CTCTCTCTCTCTTCCTTCACTGCTCTCTGTAGAAACCACTAAACAAGCTTGATTGGGGTTTCCATCATCTCTCTTCTTCGCA
TTCAGGACGCACTATTTAGAACCGTTGCTTTGGTGTCAATACTGTGAAGTATAGCCTGCATAGAGTACAGGACAGAAGAGAA
ATCTTCAAATAATTTTTCAGAAAAAATGGAGGATGAGAGTGGACTTGAGCTTAGCTTGGGTCTATCTTGTGGTGGGGGATCT
TCTGTGAAGTCCAAGGGTAAAAATGGTGCCTCCTCAAATACTAGAGCGGAAGAAGGTGATAGAGACAACAAACTAGCAGATG
ATTTTAAAGACTTTCTTCATGGAGGGGCTCAGAAGCAAGAGTCAAGTAGTAGCTCTCAAAGAAGTGATTCAGTGAAACCTAA
GGAAAACTCTTTAATGACCTCTCCAAGGCCAATGGTGATGCAGACACATCAATGAACTTGAATGGGAGAGGAGTCTGGGCTG
CAAAGAATAACAAGTCTGATGAAATAGAGGAAAGACAAACAGATGCTGGTAATAAACGCAAGACTTTGTTTGAAGAGATGAA
CCAACAGAAGAAGCATGAGAGAGAAGCTCATTACACTGATATGCATGACAAGACAAGAGCATCCCATATTTCCATAACAGAA
GATGGCTCTACTG


RU22986 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
380213

Probe ID Probe Sequeces


RU22986 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAI84658 hypothetical protein [Nicotiana tabacum] 221 1e-016
NP_194620 unknown protein [Arabidopsis thaliana] 190 6e-013
AAK96863 putative protein [Arabidopsis thaliana] 190 6e-013
CAO65474 unnamed protein product [Vitis vinifera] 142 2e-007

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q53HY2 UPF0737 protein mc410 221 1e-017

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9ILR7 Predicted protein 269 4e-022
B8Y4P5 Putative uncharacterized protein (Fragment) 248 1e-019
B9RKK7 Putative uncharacterized protein 247 1e-019
A7PEJ7 Chromosome chr11 scaffold_13, whole genome shotgun sequence 142 2e-007

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G28910.2 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink). 117 1e-006
AT4G28910.1 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink). 117 1e-006
AT4G28910.3 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48; Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source: NCBI BLink). 117 1e-006