RU23524 sequence (764 bp)


Member Information
AAAGTTTTCTAAAGAAACAGTTGAATACTTCTATTCATTCAGACAAATAGTACACAGAACTTGAACAATTGTTCATGAAAGT
TCTAATTTTCAAGATTTAAAGATCTACCATCTAACAACACTAGACAGCCATATGGAGACGATGAGAGCAAAACAACCGCTAT
AATATTTGCGGATGGAAGTGAATAAACTCCATGAACTTGGGAAATTCATTTAGTCCATGTCAAGAAACTCCATTCTTTTTCT
CATGGTGCCTTTAAGATCAGAAGCTTCTCTTTCTGCTTTCTGTGCCCTTTTAATTTCTGCAGGTGAAACACGAGTCATATGC
GGTGGAAGTTCCTCCCTCTCCGAGTCCAGCTCGCCAATTAAAACAACATTCTCCCCACGAATTACATAAAGACCCAAAGGGA
GGTCACAATAAAGTTCGCCAACAATGACCCTCTCACACGCACCCTCAAGGACAGCATTGGCAAATTGATCAAAAGAACGAAG
TACTCCTAAAAGCTTCCGACCATCTCGGAGCAGCACAAGAAGTTTCTTATCAAGATAGCTGGCAAGAGAAGTAGAGAGGTAA
ACATCTTCTGGGCCGGCCCAAGACATTGATGCTTCTTCTTCTTCTTCTTCTTATCTCAAAAGACTTGAAATTTTTCCGGTTT
CTCAAAATTCACCGAAAAATTAACCAAAACAACCGATAGTTGCATTGGCTTACAATGAAACCAAGTACCCTCAAATACACTC
CAAGAGTATACAAAGACTCTAACTTT


RU23524 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
470011

Probe ID Probe Sequeces


RU23524 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAN62239 hypothetical protein [Vitis vinifera] 614 5e-062
ABK96777 unknown [Populus trichocarpa x Populus deltoides] 601 2e-060
NP_566476 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative [Arabidopsis thaliana] 592 2e-059
ABK22805 unknown [Picea sitchensis] 572 4e-057
NP_001052905 Os04g0445800 [Oryza sativa (japonica cultivar-group)] 540 2e-053

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q5E9Z8 U6 snRNA-associated Sm-like protein LSm1 171 9e-012
O15116 U6 snRNA-associated Sm-like protein LSm1 171 9e-012
Q54W83 Probable U6 snRNA-associated Sm-like protein LSm1 170 1e-011
Q8VC85 U6 snRNA-associated Sm-like protein LSm1 168 2e-011
P87173 U6 snRNA-associated Sm-like protein LSm1 158 3e-010

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A5CA52 Chromosome chr9 scaffold_7, whole genome shotgun sequence 507 1e-049
B9T3A8 Lsm1, putative 497 2e-048
B9GVZ1 Predicted protein 494 4e-048
A9PK74 Putative uncharacterized protein 492 7e-048
B9N7F0 Predicted protein 492 7e-048

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G14080.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative 489 1e-049
AT3G14080.2 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative 489 1e-049
AT1G19120.1 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative 423 6e-042