Member Information |
| TGATTATGCTACCGTCACCATTTCCACTGTCACCGGGTGGTGCGTCATTGCTTCCCTTGTGCTCAGTGCACTTGCAAGCGCT GGATATCTACTGCTTCTGATTGAGAGGTCAAAAAAGTGCTTAGATTTTTCAGTCACCCTGTACATCGTCCATCTCTTTATCT GCATTGGTTATGGGGGTTGGCCTTCTTCGATAACATGGTGGGTTGTAAATGGTACTGGAATTGGAGTGATGGCTTTGTTAGG TGAATACCTCTGCATGAGACGTGAGCTGCAGGAGATCAAGATCCCTACAACACGATATCGCTCAAATGTTTGACCGAGGAGA AATGCAGCATGCAAGAATATTCTGGTGGGGTTATAGAGGGTATTTTTTGTTTCTTTGGAGGAGCTTCAGGATAAACCTCATG AACACCACATCCAATATTGGATGAGAAGAAATACTTTAATCTGTGGATTCTTTTGTCTATGCTGGTGGCAATTACATAGAAC TCCTGTAGAAGTTTGACACAGTGCTTCAAATGATGGGAGGTTTGAGCACATGAGACTAGGTATGAAGTGTTATAGGAAAATC ATAATGTACAATTCTAGGTGGAGCAATGAATATTGTGCTTCTGATTTCATTCTCTCTCTCTCTCTCT |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 4 | 15 | 0 | 0 | 19 |
| Probe ID | Probe Sequeces |
| yueji_11925 | CTTTTTTGACCTCTCAATCAGAAGCAGTAGATATCCAACGCTTGCAAGTGCACTGAGCAC bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| NP_001131689 | hypothetical protein LOC100193049 [Zea mays] | 390 | 3e-036 |
| AAG52261 | unknown protein; 19658-19089 [Arabidopsis thaliana] | 376 | 1e-034 |
| NP_565225 | unknown protein [Arabidopsis thaliana] | 375 | 2e-034 |
| NP_001043462 | Os01g0593600 [Oryza sativa (japonica cultivar-group)] | 374 | 2e-034 |
| ACF84148 | unknown [Zea mays] | 374 | 2e-034 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7S6Y0 | Protein SYS1 homolog | 188 | 7e-014 |
| Q8N2H4 | Protein SYS1 homolog | 180 | 6e-013 |
| Q78S06 | Protein SYS1 homolog | 180 | 6e-013 |
| A4K2N5 | Protein SYS1 homolog | 180 | 6e-013 |
| A4K2W1 | Protein SYS1 homolog | 180 | 6e-013 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9SQC3 | Putative uncharacterized protein | 376 | 1e-034 |
| B9GEK8 | Predicted protein | 346 | 4e-031 |
| B8AB47 | Putative uncharacterized protein | 338 | 3e-030 |
| B4FDL6 | Protein SYS1 | 335 | 7e-030 |
| B7EFT9 | cDNA clone:J023004I01, full insert sequence | 334 | 1e-029 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT1G79990.1 | protein binding / structural molecule | 332 | 2e-031 |
| AT1G79990.2 | LOCATED IN: endomembrane system, COPI vesicle coat, Golgi membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SYS1 homologue (InterPro:IPR016973); Has 55556 Blast hits to 24059 proteins in 620 species: Archae - 38; Bacteria - 5697; Metazoa - 25539; Fungi - 10898; Plants - 5309; Viruses - 0; Other Eukaryotes - 8075 (source: NCBI BLink). | 326 | 8e-031 |
| AT1G79990.4 | LOCATED IN: endomembrane system, COPI vesicle coat, Golgi membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SYS1 homologue (InterPro:IPR016973). | 326 | 8e-031 |
|
|