RU23913 sequence (649 bp)


Member Information
TTAGTACCCAATTTTTTTTGCTAAAAGCTAATACATAGATTACAAATGCATGGAACAACAGTAATTTGTAGCTCAGTAAACT
GAATTCCAAGACCACTTGAATCTAATGATTCCAAATCCACATCACATCAATTTTAATAAGTTACTGACATAGAAAGACCAGC
AAACTTGAAATAGAGAACAAAAGTCTTATACAGACTAAAATCCTAACGCCTCATAAACCTAGATTGATAGAACACAGTCGGT
CTTTCATAACATAATATATTCAAAGCTGTGCAGCTCCTCCAGTCTGGTGCAACATAGCATCTATCTCATCCCCATCTTCCAT
TTCAAGCTCATCAGGGGTCTGCTCTGCTCGCAGAGGACGGCCGTCAAACAGGAAGGCAATGGAGTTGAGCTCAACAGATTGG
GGATCACAGTAGGCATTCATCAGCTTCTTGAGTTGAGTGCTTCTTTTGATCCTAAAGAAGACTTGGTTCCCCTCCTGGCCTT
TCACTTTGAGGTTGATGTGAGCACCCTGATGGTTGGGCTTCTTGTCCTCCTCTTGGGGCTGGCTCGCAACTCCTGACATCGT
CTCTCTTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTAAATAATAAAAGTTAGGGGACTCTGCTTCTCCC


RU23913 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
52029

Probe ID Probe Sequeces


RU23913 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO24058 unnamed protein product [Vitis vinifera] 430 8e-041
CAO17174 unnamed protein product [Vitis vinifera] 426 2e-040
CAN71030 hypothetical protein [Vitis vinifera] 423 5e-040
CAN79327 hypothetical protein [Vitis vinifera] 422 7e-040
CAA67923 ubiquitin-like protein [Arabidopsis thaliana] 420 1e-039

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P55852 Ubiquitin-like protein SMT3 416 3e-040
P55857 Ubiquitin-like protein SMT3 390 3e-037
O13351 Ubiquitin-like protein pmt3/smt3 254 2e-021
Q7ZTK7 Small ubiquitin-related modifier 2-A 231 8e-019
Q9Z172 Small ubiquitin-related modifier 3 231 8e-019

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9IAK0 Predicted protein 453 2e-043
B9GTT9 Predicted protein 450 4e-043
B9GTT8 Predicted protein 444 2e-042
A7PX89 Chromosome chr12 scaffold_36, whole genome shotgun sequence 430 7e-041
A7QZ01 Chromosome undetermined scaffold_260, whole genome shotgun sequence 426 2e-040

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G26840.1 SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag 416 3e-041
AT5G55160.1 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag 413 7e-041
AT5G55160.2 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag 328 5e-031
AT5G55170.1 SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag 230 1e-019
AT5G55856.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag (TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124; Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink). 222 9e-019