RU23922 sequence (1091 bp)


Member Information
TTTTTTTTTTTACTTGCAAAGTAACCAATATCATCATTAAAAACTTTTGTACAATGTTATCCTTTCCTTGATGTAATGAAAA
GAAAATTGTGAAACTTCTTTTGTTCAACCTTTCATCTCTATTCTTTCTACAATTCTCTTTGAAGAGGACACGACAAAATAAA
CTTTACATGAAAATCTTTCTTCTTCTTCTTTGACAATTTTTTCTCTGATCTCTCTGTGTTACAAGTGAAAGACCATGACATC
TCTGTTATGTTTCTTCGAAAGCTCAAGCCGCAAGTTTGTTCAGTCTCTGCCATCTGTGTATTTGTTCACTTCTCGAAGGATC
AATCACACCGCACAACCTAAGCCTTTGGCTTCTGAACCTTTCATAATTCTCAGCCTCTTGCATGAAGTGAAAAACATCTCCC
ATGGAACATCTCCAAGAAGCATCCAATCTCCATCTTTGTCTTCATAAGTTGGCACAAACTCGGATCTGTTGTTGTACCCTAG
TTCCTTCTCACAATATTCACCAACCTTGAACTTGAACATGTCCTCCAAGGCCTTAAGCAGCTCTGGATATCCTTTGTAAACC
TTCAAGTCCATCTTTCGAAGGTATGGAGCTCCATCCATGCTGATTTTCACGAACATCCCACCGCTTTCTCCCTCGGTTTTCT
TCGCCTGGAAACAGTTTTTCCGGTATGATCTCACCGGTGGCCATCCAACTACTTGTGCCTTGGAGGGAGGAGGCTTGGGAGC
TGAAGAAGCATTGGATTCAGGCTCAACTGGCAATGCTCTTTTGTTGTTCGTTTTTTGTTGCTCGGATTCCTTGGTTCCGGGT
AGGCCCAATCTGAGCTCAGTGGCTTCAAGGTTGAGATCCTCTGCTTGGAAAGCCATAGCTAACTTTGGAGGTTTCTGATGAA
ATATGTTAAAGAATATTGATGAACTTCTTCACAAACTTTGATGATGATGATTCTTCTCTCTGTATTCTATGGAGGATTGAGA
TGCAGATTGAAATGGGAGATGTTTTTCACTTCATGCAAGAGGCTGAGAATTATGAAAGGTTCAGAAGCCAAAGGCTTAGGTT
GTGCGGTGTGTTTGTTCACTTCTCG


RU23922 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
31471079

Probe ID Probe Sequeces
yueji_01419TCAAGTCCATCTTTCGAAGGTATGGAGCTCCATCCATGACTGATTTTCACGAACATCCCA bl2seq
yueji_04238GTTGTTGTACCCTAGTTCCTTCTCACAATATTCACCAACCTTGAACTTGAACATGTCCTC bl2seq
yueji_06054AGGCTGAGAATTATGAAAGGTTCAGAAGCCAAAGGCTTAGGTTGTGCGGTGTGATTGATC bl2seq
yueji_10704GAAAAACATCTCCCATTTCAATCTGCATCTCAATCCTCCATAGAATACAGAGAGAAGAAT bl2seq


RU23922 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAC84712 aux/IAA protein [Populus tremula x Populus tremuloides] 579 1e-057
CAO43075 unnamed protein product [Vitis vinifera] 571 9e-057
CAN74317 hypothetical protein [Vitis vinifera] 565 4e-056
CAO71286 unnamed protein product [Vitis vinifera] 565 4e-056
AAQ74955 Gbiaa-Re [Gossypium barbadense] 555 6e-055

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P33077 Auxin-responsive protein IAA4 584 2e-059
P49679 Auxin-induced protein IAA4 534 1e-053
Q38822 Auxin-responsive protein IAA3 513 4e-051
P32294 Auxin-induced protein 22B 499 2e-049
O24542 Auxin-induced protein 22D 495 4e-049

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9RTF5 Auxin-responsive protein IAA4, putative 603 2e-060
Q0WTK3 IAA4 584 3e-058
Q6VMQ2 Gbiaa-Re 580 8e-058
Q9XEY1 Nt-iaa2.3 deduced protein 573 5e-057
B9MZD2 Predicted protein 551 2e-054

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G43700.1 ATAUX2-11 (AUXIN INDUCIBLE 2-11); DNA binding / transcription factor 584 2e-060
AT1G04240.1 SHY2 (SHORT HYPOCOTYL 2); transcription factor 514 3e-052
AT4G14560.1 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); protein binding / transcription factor 477 5e-048
AT3G23030.1 IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2); transcription factor 385 2e-037
AT1G04250.1 AXR3 (AUXIN RESISTANT 3); transcription factor 370 1e-035