Member Information |
| GCGATAGCGAAAAATAAGGGCGAGAAAGTTCAAACTCGCCTGAAAGAAGAAGAAGAAGAAGAACAAGGAAGCGACGCACTCT TTTCTCCTCAACCGCAACAACAACAACAATGACGACTTCGAGGCGACTGGCTGATAGGAAGGTGGAGAGGTTCGAGAAGAAC ATCACCAAGAGAGGCGCCGTGCCGGAGACGACCGCCAAGAAGGGCAAGGATTATCCCGTCGGCCCTATTCTCCTCGGCTTCT TCATCTTCGTTGTTGTTGGCTCATCTCTGTTTCAGATCATCAGGACAGCTACCACTGGAGGCATGGCCTAAATTGAGCCTGC TGCTTCTGCTGAGGTTTCTAAGTTATGAAAGAGATGGTGTTAGATCGAATCATTGTCATTTTACTTTTTCTTTTTGTTTAGC CGGTAACTGATATACAAGAATGTACTACAAGCTGTGGTTTCTATCTTGTTAAGGTCTGTGTAGACCTTGTGAAAACGAAGTA AGTTTAAATAATAAACTACCCCCTTCCTATCTAATTCATTTATCTATTAAATTTTATTTGATTTTTTC |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 14 | 7 | 0 | 0 | 21 |
| Probe ID | Probe Sequeces |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO66154 | unnamed protein product [Vitis vinifera] | 321 | 2e-028 |
| AAQ09002 | hypothetical protein [Phaseolus vulgaris] | 313 | 2e-027 |
| AAT38818 | membrane protein [Brassica juncea] | 311 | 3e-027 |
| AAF99731 | F17L21.12 [Arabidopsis thaliana] | 310 | 4e-027 |
| NP_564277 | unknown protein [Arabidopsis thaliana] | 308 | 8e-027 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q3T073 | Stress-associated endoplasmic reticulum protein 2 | 136 | 6e-008 |
| Q8N6R1 | Stress-associated endoplasmic reticulum protein 2 | 136 | 6e-008 |
| Q6TAW2 | Stress-associated endoplasmic reticulum protein 2 | 136 | 6e-008 |
| Q5REZ1 | Stress-associated endoplasmic reticulum protein 1 | 117 | 1e-005 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9RMD3 | Stress associated endoplasmic reticulum protein, putative | 296 | 2e-025 |
| Q2M5D2 | Predicted membrane protein 2 (Fragment) | 288 | 2e-024 |
| A7QP46 | Chromosome chr1 scaffold_136, whole genome shotgun sequence | 285 | 3e-024 |
| Q2M5F0 | Membrane protein | 285 | 3e-024 |
| Q7X9E1 | Putative uncharacterized protein | 284 | 4e-024 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT1G27350.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27330.1); Has 267 Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | 283 | 6e-026 |
| AT1G27330.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27350.1); Has 267 Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | 283 | 6e-026 |
|
|