RU24457 sequence (1117 bp)


Member Information
TCGGCACGAGTTTTCATGCACCACTCTCCTCCGATCCGTCTCACTCTTCCCTCTTTCCAATTCGAATAGGCCCCAATTGACT
CACCAAATCCGATTCCGAAACGCACCGTTTAGATCCATCCCCCCACATGGAGATGGCCACCAGTCCCCGAACCGTCGAGGAG
ATCTTCAAGGATTACGGTGCTAGAAGAGCCGCCGTCGTCCGTGCTTTGACTTATGATGTTGATGAATTTTACGGACTCTGTG
ATCCAGAAAAGGAGAATTTGTGTTTGTATGGACACCCGAATGAGTCCTGGGAAGTGACACTTCCGGCAGAGGAAGTCCCGCC
GGAGCTTCCTGAGCCAGCGCTTGGGATCAATTTTGCAAGGGATGGCATGAACCGCAAGGACTGGCTTTCCCTGGTCGCTGTT
CATAGCGATTCTTGGCTGCTTTCTGTGGCTTTCTATTTTGGAGCACGACTTAATCGTAATGAGAGGAAACGACTTTTTAGCT
TGATCAATGATCTGCCTACCGTCTTTGAAGTTGTGACGGATAGGAAACCCGCTAAAGACAAGCCTAGTGTGGATAGCGGAAG
CAAATCCCGAGGCAGCACAAAGAGATCTGGTGATGGAATAATGAAAAGCAATCCTAAGCTAGCAGATGAGAGTTTTGAGGAG
GAGGATGACGAACATAGTGAAACTCTTTGTGGGAGCTGTGGCGGAAATTACAATGCAGATGAATTTTGGATTGGCTGTGACA
TCTGCGAAAGATGGTTCCATGGAAAATGCGTGAAGATAACACCTGCCAAGGCCGAGAACATCAAGCAATACAAATGCCCGTC
TTGCAGCTTGAAAAGGAGCAGGCAGTAGTGGTCACTCCGTCACTCAGACCTGTGAGGGAAAGACAAATAGGCGCGCGTCGTC
TCAGTGGCTGACAGAGTAGCATAGAAATGTCACTATTTAATGTAATGAATTTGTTGTTGTGATGTTTGTTTATAATAGATGC
TTTTTCAAAGGGGTTGAAGCCTGCCTTCTTCTCCCATGAAACATTTCTCCAGCTTTATATTATCTTCCAGTTATTAATTTAT
GACAAATGTATGAATAACATTTGCTTCTTGTTAGTGTTAATGTTAAAAAAA


RU24457 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
7150224

Probe ID Probe Sequeces
yueji_00847GAAGCCTGCCTTCTTCTCCCATGAAACATTTCTCCAGCTTTATATTATCTTCCAGTTATT bl2seq


RU24457 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABK95594 unknown [Populus trichocarpa] 1167 7e-126
CAO50140 unnamed protein product [Vitis vinifera] 1164 2e-125
ABJ99761 PHD4 [Medicago truncatula] 1144 3e-123
ABK93270 unknown [Populus trichocarpa] 1124 7e-121
CAN72300 hypothetical protein [Vitis vinifera] 1064 6e-114

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O81488 PHD finger protein At5g26210 455 2e-044
Q12830 Nucleosome-remodeling factor subunit BPTF 138 1e-007
Q9W0T1 Nucleosome-remodeling factor subunit NURF301 138 1e-007
Q6ZMT4 JmjC domain-containing histone demethylation protein 1D 127 2e-006
Q3UWM4 JmjC domain-containing histone demethylation protein 1D 125 4e-006

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B9SQ16 Phd/F-box containing protein, putative 913 2e-096
A9PGU1 Predicted protein 911 3e-096
A7QHQ9 Chromosome chr8 scaffold_99, whole genome shotgun sequence 906 1e-095
A9PA67 Putative uncharacterized protein 887 2e-093
A0FK64 PHD4 (Fragment) 879 2e-092

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G05610.1 AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding 788 5e-084
AT5G05610.2 AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding 788 5e-084
AT3G11200.1 AL2 (ALFIN-LIKE 2); DNA binding / methylated histone residue binding 778 7e-083
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding 669 3e-070
AT3G11200.2 AL2 (ALFIN-LIKE 2); DNA binding / methylated histone residue binding 624 5e-065