Member Information |
| CAGTGAGATTCTGAAGCGCGGCGGCAGCATGTTCTTCCTCCCTGAACTGAACGTACACATTCCCAACCATGTGGTCAGCCAA ATTATCACAGATATTCAAGCTCTCGATCTGTCCGTACTTGCTCAGCTCCTCGAATAGATCCTCATAGAAATCCTCGAAGTTG TCTTGGATCTTGCGGGGGTCGAGGGCCTGGCCCTGAGGGTCGACGCCGGGGTTGGTGAGCATATCGGGGCGCTGGTACATGT TGGAGAGGAGAAGGGTGGGGCTGATGCTGGGCTTGGTGTGGAGGCGAGAGCATTTGTCGCCATGTCGGCAGGGGCAAATCTT GAAGTAGAAAGGGCAGTTAACCCTGTCCTTCTCTGTGCCGAAGATCGATGCCAAGTGCTCTTCCCTCCCTTTCTGCTGA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 4 | 0 | 0 | 1 | 5 |
| Probe ID | Probe Sequeces |
| yueji_01530 | ACTTGCTCAGCTCCTCGAATAGATCCTCATAGAAATCCTCGAAGTTGTCTTGGATCTTGC bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO15975 | unnamed protein product [Vitis vinifera] | 623 | 1e-063 |
| NP_001034752 | hypothetical protein LOC664621 [Mus musculus] | 617 | 5e-063 |
| XP_001696419 | U2 snRNP auxiliary factor, small subunit [Chlamydomonas reinhardtii] | 467 | 1e-045 |
| XP_001712926 | mRNA splicing factor U2 associated factor [Bigelowiella natans] | 394 | 4e-037 |
| ACF24526 | mRNA splicing factor U2 associated factor [Gymnochlora stellata] | 383 | 7e-036 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q9ZQW8 | Splicing factor U2af small subunit A | 489 | 2e-049 |
| Q6AUG0 | Splicing factor U2af small subunit B | 478 | 4e-048 |
| Q8BGJ9 | Splicing factor U2AF 26 kDa subunit | 331 | 5e-031 |
| Q7TP17 | Splicing factor U2AF 26 kDa subunit | 331 | 5e-031 |
| Q3T127 | Splicing factor U2AF 26 kDa subunit | 330 | 6e-031 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7PPK3 | Chromosome chr8 scaffold_23, whole genome shotgun sequence | 546 | 8e-055 |
| Q99L29 | cDNA sequence BC003883 | 540 | 4e-054 |
| B8LNG3 | Putative uncharacterized protein | 539 | 5e-054 |
| B9MTN5 | Predicted protein | 531 | 4e-053 |
| B9SRG2 | U2 snrnp auxiliary factor, small subunit, putative | 531 | 4e-053 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT5G42820.2 | U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 513 | 6e-053 |
| AT5G42820.1 | U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 513 | 6e-053 |
| AT1G27650.1 | ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 507 | 3e-052 |
| AT1G27650.2 | ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 272 | 6e-025 |
| AT3G44785.1 | U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative | 247 | 5e-022 |
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