RU26420 sequence (1289 bp)


Member Information
AAAGAAACGAAACTGGTCTCTCTCTTAATTAATACGTACTGGCTTCTCTTACTCTATGATTCTCTAATTAAGTAGTCTCCTT
ATTAATTATTCCTTGGAAAGGATCAAGAAGAAGATGACGACCCACCGTTAGTGACACCGTGCGGGTGATCGCCGCCAAGCTG
GTAGTGATGGTGAATCGGGTTCGGAATGTTGCTCAGACTCCCACCACCGTTGTTGTTGTTGTTGTTGGGATGATCGTCGTCC
TCGTCCTCTTCGTTGCTGGTGTTATTGTTGTTACCGTTCATGTTGTTGTGGATTTGGTCCAAAGTACTGTTGGGAAGTCTCG
CGGCGGCGGTTGTGTTAATGCCATTACCAGCGCCACCGCTGCCGTCGCGCTTGGCGAAGGTGTTCTTGTTGTTGTGCATCCA
CACCTTGAGAACTCCTTTATCGACTCCGATTTCGTTGCAGAACTCATGGACGATGTCCTCGTCGCGCTTCTGCATCTTCCAC
CCAACTCTCTCCGCAAACTGGAACATCTTGTCCTTCTGCTCCTGGCTAAACTTGGTCCGGAACCGCTTCCTCGCATTAGGCC
CGCCGGGGGACACAATTTGGCCGCCGTGGTGGTTGTTCGGGTTGTCAGAAATCCCGGTGGAGAGAGCCAGCAGCATGTGGGG
AGCTGAAGGGTAGTAGGAGGAGGAGATCGGCGGAGGGGAAGCTGAATTGGGGCTCCTGTTCCCGATGAGTGGCGGCGGCGGG
TGGTGGCGGTGGTGGGGCTGGTACTCGATGACATGAGTTGCGGGAGCGACTGCCGGAATATTGTCCTCCGGCTCACGGCGGT
GGAAATTGCGGTGGCATCCGCAGGCGGCGCATTTTAGCGAGGTGGGGTCGGTTGGGGTGGCGGTGGGGGAAGGCATGAACTC
GCCGCAACCGTCGAGGGCGTGGCCGCCCAAGCTGGCGGCGTGGTTCTTGAGGCATTCTTTGTAGGTGACGACTACGGGAGTG
ACGGGGATGCTGCTGTTGTGGTGGTGGTGGTGGGCGGGGTGGTGGCGCTTGAGGACCCCGTTGTCTGAAGGAGATGGGCTTG
GCGGGCTGGATCCGGGTCGGAGTGTCGCTGTCGGCTTCGGGGGATTTGGTGCTGGTGGTGGTCGTGGTCGTGGTGGTGATGG
AAGGCGCTATATCCATCACTCAAAACATCTAACAGTCTCAGAAACCGAGACAAAACGGAGGATTAAAGAAGGACCAAATTAT
AAAAGACTGGTAAAAGTAGTCTGCTGGCTGGTTTAAGGGGTTAGGGTTAGGAAGAGTCG


RU26420 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
580013

Probe ID Probe Sequeces
yueji_06718TCATAGAGTAAGAGAAGCCAGTACGTATTAATTAAGAGAGAGACCAGTTTCGTTTACTTT bl2seq


RU26420 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
ABY61030 zinc finger-homeodomain protein 1 [Cucumis sativus] 954 4e-101
CAO48383 unnamed protein product [Vitis vinifera] 785 2e-081
CAN64768 hypothetical protein [Vitis vinifera] 689 2e-070
CAC34409 ZF-HD homeobox protein [Flaveria bidentis] 571 1e-056
CAO14979 unnamed protein product [Vitis vinifera] 512 8e-050

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q9SB61 ZF-HD homeobox protein At4g24660 221 3e-017
Q9FKP8 ZF-HD homeobox protein At5g65410 216 1e-016

TrEMBL top hits
Blast detail
Accession No. Description Score e value
B0LK19 Zinc finger-homeodomain protein 1 (Fragment) 598 8e-060
B9IJX6 Predicted protein (Fragment) 586 2e-058
B9H0F6 Predicted protein (Fragment) 572 8e-057
A2Q1B8 Homeobox domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich dimerisation region; Homeodomain-like 564 7e-056
A7QED3 Chromosome chr1 scaffold_84, whole genome shotgun sequence 542 2e-053

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT3G28920.1 AtHB34 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 34); DNA binding / transcription factor 479 4e-048
AT2G02540.1 ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21); DNA binding / transcription activator/ transcription factor 370 2e-035
AT1G14440.1 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor 364 8e-035
AT1G14440.2 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor 364 8e-035
AT5G39760.1 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23); DNA binding / transcription factor 295 8e-027