Member Information |
GGGGTCTGACAAAAACAAAGTCCCTTCCATTTCCACGCGCACACCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTC CTTCTCCTTCAAACCCTCCCGCTACACCAACCAGGAATCGCCATGAAAGGAGGCAAATCCAACACCAAGAAAGCCGACTCCG AGCTTGCTGTGAATAAGAAGCCTGCTAAGGTTACTAGAGCGAGTAAGAAGGCGGTCAAGGACCCTAACAAGCCTAAGAGGCC GGCCAGTGCCTTCTTCGTTTTCATGGAAGAGTTCAGGAAGCAGTTCAATAAGGAAAACCCCAACAACAAAGCAGTTTCCGCT GTGGGCAAGGCTGCTGGTGCAAAATGGAAGTCAATGTCTGAGGCTGAGAAGGCACCTTATGTGGCCAAGTCAGACAAGAGGA AGGTTGAGTATGAGAAGTTAATGAAGGCTTATAACATGAAACAGGCTGAAGGCAACACTGCAGCGGAGGAAGAAGGATCTGA GGTGAATGATGATGAGGATGGAGATGAAGAAGGCAGTGATGAGGAGGATGATGATGAGTAGAAAATGGCACAAGGATAACAT AGGGATCTAGCTTGTGACTGTTTGATCATTCCATGTGATGGTTCGATTATTCAATGTTACTTTTCGTTTCGCCTTCTTTCCT TTAAGGAAAATGTATTTCGTCTCCCTCTATCTAATTGTCTGTTGTTTTCTAAATTAATAGTTGTAGAAGGGAGATTTACTCT ATCTGTAATTTCTGAAGCCTAGTGACTTAGCTAAGTGAATTTATCTTCTGTAGAGCAGCTAGACTGTTTGATTTACATTCTT ATGATAATGCAGTGATTTGATATATGAATTACTAATTCCTGTTGAAAAAAAAA |
Digital Expression: |
Control | Ethylene | WDS | GenBank | Total |
---|---|---|---|---|
15 | 9 | 0 | 3 | 27 |
Probe ID | Probe Sequeces |
yueji_01072 | CCTAGTGACTTAGCTAAGTGAATTTATCTTCTGTAGAGCAGCTAGACTGTTTGATTTACA bl2seq |
GenBank top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
P26585 | HMG1/2-like protein (Protein SB11) | 511 | 6e-050 |
NP_001077569 | HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis thaliana] | 464 | 2e-044 |
NP_564123 | HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor [Arabidopsis thaliana] | 462 | 3e-044 |
AAY26151 | high mobility group protein [Cucumis sativus] | 455 | 2e-043 |
NP_001031074 | HMGB2 (HIGH MOBILITY GROUP B 2) [Arabidopsis thaliana] | 455 | 2e-043 |
Swiss-Prot top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
P26585 | HMG1/2-like protein | 354 | 7e-033 |
P40619 | HMG1/2-like protein | 289 | 2e-025 |
P40620 | HMG1/2-like protein | 274 | 1e-023 |
P27347 | DNA-binding protein MNB1B | 256 | 2e-021 |
P40621 | HMG1/2-like protein | 245 | 3e-020 |
TrEMBL top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
B9R8P6 | DNA-binding protein MNB1B, putative | 353 | 1e-031 |
A9PHM9 | Putative uncharacterized protein | 338 | 6e-030 |
B9GQ02 | High mobility group family | 338 | 6e-030 |
Q9LM85 | F2D10.18 | 338 | 6e-030 |
Q41026 | HMG 1 protein | 332 | 3e-029 |
Arabidopsis top hits |
Blast detail |
Accession No. | Description | Score | e value |
---|---|---|---|
AT1G20693.1 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 331 | 3e-031 |
AT1G20693.2 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 331 | 3e-031 |
AT1G20693.3 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 331 | 3e-031 |
AT1G20696.1 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 304 | 4e-028 |
AT1G20696.3 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | 304 | 4e-028 |
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