Member Information |
| GAAAGCGAAAGTCTTCCTAGCTTCTTTATCCCTCTAGCCTTTACTCTTTAACAATCATCGCCGACTCTTCATTCTTCGCTCT CCTCCAATTTCCATAAGGGATTTTGAATCGGTGGGTGAAGTGTGAAGAAGAAGAAGAAGATGTGGGCAGCTTCGTGCCTTGC GTCGTGTTGTGCTGGGTGTGCTTGCAATTTGTGCCAGTCGGCGGTTTCTAGTATTAGCCGCCGCTCTGCAAGGATTGCATAC TGTTTCCTCTTTGCGTTTTCTCTCATTGCTTCATGGATTCTCCGCGACGTCGCGCCGCCTCTACTGGAAAAGATACCTTGGA TTAATCATTTTCATCAGATACCGTACAGGGAGTGGTTTGAAACCGAGGCTGTGCTTCGTGTTAGCTTGGGAAACTTTTTGTT CTTCACCATCCTGTCAGTTGTGATGATTGGTGTGAAGAGTCAAAAGGATCCCCGTGATAGTATTCCTATTTTGGATGGATGA TGAAAGTTACTTGCTGGTTGCTTTTGGTGATCTTCTCATTGTTTTTCATACCAAATGGGATTATTAGTTTCTATGAGACAAT TGCAAAGTTTGGCTCAGGATTCTTTCTTCTCGTACAAGTTGTTCTTCTGTTGGATTTTGTTCATGGATGGAATGACAAATGG GTTGGATATGATGAGCAGTTCTGGTATGTTGCTCTTTTTGTTGTTTCTCTAGTTTGTTATCTGGCGACGTTCGTCTTCTCTG GACTTCTTTTTCATTTGTTCACGCCATCTGGACATGACTGTGGGCTGAACACCTTCTTTATTGTCATGACTCTGATATTCGT CTTCGTGTTTCTTATAGTGGCACTGCATCCTACTGTAAGTGGCAGTATTTTACCCGCGTCAGTTGTATCTGTGTACTGTACA TACCTCTGCTACAGTGCACTTGCTAGTGAGCCGAGGGACTATGAGTGCAATGGTCTTCACAAGCATTCTAAAGCTGTTTCCA CTGGGACTCTTACCTTAGGTCTGCTTACCACTGTTCTATCTGTGGTTTATTCTGCTGTGCGTGCTGGATCTTCCACTACTCT TCTGTCCCCGCCTAGTTCGCCTCGTGCTGGTGCTGGAAAACCACTGCTCCCATTGGATAAGCCAGAAGAACATGAAGAAAAT GAGAAAGCCAAGTCTGTGTCGTATTCATATGCCTTCTTCCACATCATCTTCTCACTTGCAAGTATGTACTCGGCAATGCTTC TGACAGGGTGGTCAACCTCAGTTGGGGAGAGTGGGAAGTTGATTGACGTGGGGTGGCCGTCCGTCTGGGTGAGGGTCATGAC TAGTTGGGCAACTGCAGGTCTCTACATCTGGTCCCTTTTGGCTCCTATTCTGTTCCCTGAGAGGGAATTTTAAAATCCTGCC ACTACCAACTTAGAGATAAGAAAAAAACTTTGCTCATGATCAATGTCCGATCGAGCATGCTTATTGTTTGTAATGTGTATGC CTCTGCTATCCTAAAAAAAGGTAACTTTGTGCTCTGTAAATAAAATGATTTGTGTCGACTTTCGGAACAACCAATTTGCCCC TCTTTAATATTGTCGGGTTTGATATATACTGCTTGAACTTGCTTGGTTTACTGAGAAATAAAGTTAAACCTGATCTTGGATG GAGTCTCAAAAAAAAA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 58 | 79 | 1 | 5 | 143 |
| Probe ID | Probe Sequeces |
| yueji_06408 | TATGCCTTCTTCCACATCATCTTCTCACTTGCAAGTATGTACTCGGCGATGCTTCTGACA bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO23151 | unnamed protein product [Vitis vinifera] | 1362 | 3e-148 |
| ABK96018 | unknown [Populus trichocarpa] | 1359 | 7e-148 |
| NP_173069 | TMS membrane family protein / tumour differentially expressed (TDE) family protein [Arabidopsis thaliana] | 1355 | 2e-147 |
| NP_001048364 | Os02g0792900 [Oryza sativa (japonica cultivar-group)] | 1273 | 6e-138 |
| EAZ24909 | hypothetical protein OsJ_008392 [Oryza sativa (japonica cultivar-group)] | 1273 | 6e-138 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q8K0E7 | Serine incorporator 2 | 193 | 8e-014 |
| A7S4N4 | Probable serine incorporator | 189 | 2e-013 |
| A9UY97 | Probable serine incorporator | 186 | 5e-013 |
| A8WCG0 | Serine incorporator 4 | 146 | 2e-008 |
| A6NH21 | Serine incorporator 4 | 145 | 3e-008 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| B9RGQ9 | Membrane protein PB1A10.07c, putative | 1139 | 2e-122 |
| A9PI15 | Predicted protein | 1136 | 5e-122 |
| A7PVH6 | Chromosome chr9 scaffold_33, whole genome shotgun sequence | 1132 | 1e-121 |
| Q9S9L9 | T24D18.26 protein | 1130 | 2e-121 |
| B9GXN0 | Predicted protein | 1128 | 4e-121 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT1G16180.1 | TMS membrane family protein / tumour differentially expressed (TDE) family protein | 1131 | 1e-123 |
| AT3G06170.1 | TMS membrane family protein / tumour differentially expressed (TDE) family protein | 841 | 6e-090 |
| AT2G33205.1 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: MEE55 (maternal effect embryo arrest 55) (TAIR:AT4G13345.1); Has 602 Blast hits to 593 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 380; Fungi - 90; Plants - 84; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | 214 | 3e-017 |
| AT4G13345.1 | MEE55 (maternal effect embryo arrest 55) | 212 | 5e-017 |
| AT4G13345.2 | MEE55 (maternal effect embryo arrest 55) | 212 | 5e-017 |
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