RU27612 sequence (484 bp)


Member Information
GCACGAGCAAACCCCTTCCATTCTTGATCGGATTGGAATCGAAGCTGCTCCAGATCAGCGAAGAAAATGGCGAGAGGTAAGA
TCCAGATCAAGAGGATAGAGAACGTGACGAATAGGCAGGTCACCTACTCCAAGAGAAGGAACGGCCTCTTCAAGAAGGCCAA
CGAGCTCACTGTTCTCTGTGATGCTAAGGTTTCTCTCCTCATGCTTTCCTCTTCCGGGAAGCTTCATGAATTCATCAGCCCC
TCCACCACGACAAAGCAAGTGTACGATGAGTACCAGAAGCTCCTCGGAATTGACCTTTGGAAATCGCACTATGAGACAATGC
AAGAAAATTTGAAGAAGCTGAAAGAGATAAATAAGAGTCTTAGAAGGCAGATCAGTCACAGGGTGGGCGAGTGTTTGAACGA
TCTGAGATTCGCTGAACTGCACAGTCTTGAGAAAGAAATGGAAAGCGCTGTAGAAGTTGTTCGTAATCGCAAGC


RU27612 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
00011

Probe ID Probe Sequeces
yueji_12111AACTGCACAGTCTTGAGAAAGAAATGGAAAGCGCTGTAGAAGTTGTTCGTAATCGCAAGC bl2seq


RU27612 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
BAC79180 MADS-box protein [Rosa rugosa] 698 2e-072
AAR88330 AP3 [Fragaria x ananassa] 632 8e-065
AAX37273 MADS box protein [Cucumis sativus] 555 7e-056
AAX13301 MADS box protein AP3 [Lotus corniculatus var. japonicus] 553 1e-055
AAQ81636 MADS-box protein GmNMH7 [Glycine max] 549 3e-055

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q07472 Floral homeotic protein PMADS 1 523 6e-053
P23706 Floral homeotic protein DEFICIENS 507 4e-051
P35632 Floral homeotic protein APETALA 3 474 3e-047
Q42498 MADS-box protein CMB2 434 1e-042
Q944S9 MADS-box transcription factor 16 426 1e-041

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
Q7X9I8 MADS-box protein 698 2e-072
Q5VJN1 AP3 632 7e-065
Q58IJ2 MADS box protein 555 6e-056
Q533S3 MADS box protein AP3 553 1e-055
Q5VKS3 MADS-box protein GmNMH7 549 3e-055

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G54340.1 AP3 (APETALA 3); DNA binding / transcription factor 474 3e-048
AT5G20240.1 PI (PISTILLATA); DNA binding / transcription factor 321 2e-030
AT3G58780.1 SHP1 (SHATTERPROOF 1); DNA binding / protein binding / transcription factor 277 2e-025
AT3G58780.2 SHP1 (SHATTERPROOF 1); DNA binding / protein binding / transcription factor 274 5e-025
AT2G42830.1 SHP2 (SHATTERPROOF 2); protein binding / transcription factor 273 6e-025