RU28426 sequence (159 bp)


Member Information
CCATCCGTTGCTCAAACTTCTCATCAGAGCAATTGAGAAGCCATCCAAGAGAGCATTTCAACCCTTTCTTTGTTACCATCTT
ATGCCTTGGTTTTATGGTGGATTCCAGACCATAAGTGAAGAATGCTGGGAAAGCAACCAAGTCATCCAAAGGCCTTT


RU28426 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10001

Probe ID Probe Sequeces


RU28426 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
CAN74988 hypothetical protein [Vitis vinifera] 251 2e-020
CAO22461 unnamed protein product [Vitis vinifera] 251 2e-020
NP_192208 mitochondrial transcription termination factor family protein / mTERF family protein [Arabidopsis thaliana] 245 9e-020
AAK55704 AT4g02990/T4I9_13 [Arabidopsis thaliana] 245 9e-020
NP_001055500 Os05g0404000 [Oryza sativa (japonica cultivar-group)] 219 9e-017

Swiss-Prot top hits
Accession No. Description Score e value
no blast result!

TrEMBL top hits
Blast detail
Accession No. Description Score e value
B9IA08 Predicted protein 258 3e-021
A5BTA9 Putative uncharacterized protein 251 2e-020
A7PU38 Chromosome chr7 scaffold_31, whole genome shotgun sequence 251 2e-020
B9SFM8 Putative uncharacterized protein 250 2e-020
Q93WJ2 AT4g02990/T4I9_13 245 9e-020

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT4G02990.1 mitochondrial transcription termination factor family protein / mTERF family protein 245 5e-022
AT2G44020.1 mitochondrial transcription termination factor-related / mTERF-related 173 1e-013
AT2G34620.1 mitochondrial transcription termination factor-related / mTERF-related 110 2e-006
AT4G14605.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: EMB2219 (embryo defective 2219) (TAIR:AT2G21710.1); Has 760 Blast hits to 374 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0; Plants - 624; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). 105 8e-006