Member Information |
| CCAACATGCCACCACCACGACGAGTCAGTATCTGATAGTTACGAGTCAGAATTGCTTTGTAATATTCTTTCTGCTTGCTGCT TAATTCAATGCGTAATATAAGTTCCTTCTTAGGAGGTAGTTCTTTCATGACATCTTTTTTCACCCTTCTAAGAAGATGAGGA GCAAGTATTTTGTGAAGCCTGGAGATCTGCTCCTCTTGATTTATATCCTTAAACTCTTCCTGGAACTCCTCTAGA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 1 | 0 | 0 | 0 | 1 |
| Probe ID | Probe Sequeces |
| yueji_14657 | AGCCTGGAGATCTGCTCCTCTTGATTTATATCCTTAAACTCTTCCTGGAACTCCTCTAGA bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| CAO44279 | unnamed protein product [Vitis vinifera] | 379 | 2e-035 |
| B84645 | hypothetical protein At2g25170 [imported] - Arabidopsis thaliana | 353 | 2e-032 |
| NP_565587 | PKL (PICKLE) [Arabidopsis thaliana] | 353 | 2e-032 |
| BAF01271 | putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] | 353 | 2e-032 |
| XP_001778241 | SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] | 334 | 4e-030 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q9S775 | CHD3-type chromatin-remodeling factor PICKLE | 353 | 2e-033 |
| O16102 | Chromodomain-helicase-DNA-binding protein 3 | 260 | 1e-022 |
| Q12873 | Chromodomain-helicase-DNA-binding protein 3 | 251 | 1e-021 |
| Q8TDI0 | Chromodomain-helicase-DNA-binding protein 5 | 249 | 2e-021 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 | 247 | 3e-021 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7P5Y0 | Chromosome chr4 scaffold_6, whole genome shotgun sequence | 379 | 2e-035 |
| B9IL39 | Chromatin remodeling complex subunit (Fragment) | 379 | 2e-035 |
| B9HAU9 | Chromatin remodeling complex subunit (Fragment) | 374 | 9e-035 |
| B9RNX6 | Chromodomain helicase DNA binding protein, putative | 373 | 1e-034 |
| A9RX41 | SNF2 family DNA-dependent ATPase (Fragment) | 334 | 4e-030 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT2G25170.1 | PKL (PICKLE); ATPase/ DNA binding / DNA helicase | 353 | 1e-034 |
| AT4G31900.1 | chromatin remodeling factor, putative | 268 | 1e-024 |
| AT5G44800.1 | CHR4 (CHROMATIN REMODELING 4); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding / protein binding / zinc ion binding | 218 | 6e-019 |
| AT2G13370.1 | CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding | 182 | 9e-015 |
| AT5G18620.1 | CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | 180 | 2e-014 |
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