Member Information |
| CCGGGGTTAGAATACAATAGTACGGGGCGCTGGTACATGTTGGAGAGGAGCAGAGTCGGGCTGATCGTCGGCCGGTTGTGGA GACGGGAGCACCGGTCGCCGTGACGGCACGCGCCGATCTTGAAATAGAACGGGCAGTTCACCCGGTCCTTCTCGGTCCCGAA TATCGAAGCCAAGTGCTCCGCCATCGCTACTCTTCTCTCTCCGTCGTCGAGTGAGCCCCAA |
Digital Expression: |
| Control | Ethylene | WDS | GenBank | Total |
|---|---|---|---|---|
| 1 | 0 | 0 | 0 | 1 |
| Probe ID | Probe Sequeces |
| yueji_02721 | TGAAATAGAACGGGCAGTTCACCCGGTCCTTCTCGGTCCCGAATATCGAAGCCAAGTGCT bl2seq |
GenBank top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| NP_174086 | ATU2AF35A; RNA binding [Arabidopsis thaliana] | 304 | 1e-026 |
| AAL06332 | U2 auxiliary factor small subunit [Arabidopsis thaliana] | 304 | 1e-026 |
| NP_199096 | ATU2AF35B; RNA binding [Arabidopsis thaliana] | 304 | 1e-026 |
| AAL06331 | U2 auxiliary factor small subunit [Arabidopsis thaliana] | 304 | 1e-026 |
| CAO66301 | unnamed protein product [Vitis vinifera] | 304 | 1e-026 |
Swiss-Prot top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| Q6AUG0 | Splicing factor U2af small subunit B | 295 | 9e-027 |
| Q9ZQW8 | Splicing factor U2af small subunit A | 289 | 4e-026 |
| Q29350 | Splicing factor U2AF 35 kDa subunit (Fragment) | 248 | 2e-021 |
| Q3T127 | Splicing factor U2AF 26 kDa subunit | 248 | 2e-021 |
| Q8BGJ9 | Splicing factor U2AF 26 kDa subunit | 248 | 2e-021 |
TrEMBL top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| A7QPI3 | Chromosome chr18 scaffold_137, whole genome shotgun sequence | 304 | 1e-026 |
| B7FJE0 | Putative uncharacterized protein (Fragment) | 304 | 1e-026 |
| B9GPM3 | Predicted protein | 304 | 1e-026 |
| B9R8U8 | U2 snrnp auxiliary factor, small subunit, putative | 304 | 1e-026 |
| B4FAF4 | Putative uncharacterized protein | 298 | 6e-026 |
Arabidopsis top hits |
Blast detail |
| Accession No. | Description | Score | e value |
|---|---|---|---|
| AT1G27650.1 | ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 304 | 7e-029 |
| AT5G42820.2 | U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 304 | 7e-029 |
| AT5G42820.1 | U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | 304 | 7e-029 |
| AT3G44785.1 | U2AF splicing factor subunit, putative / U2 auxiliary factor 38 kDa subunit, putative | 249 | 2e-022 |
| AT1G10320.1 | U2 snRNP auxiliary factor-related | 159 | 4e-012 |
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