RU40292 sequence (236 bp)


Member Information
CTCTGGAGAACCGCAATAGCAATTCTTCTTCTTTATATTGCCATTGGAATCATGAACCTGATCCATTATATAATTGTAATGA
TAAGTCAACTCTTGCAACGGAGGAATGTTCTCAGCGGCAAAGAACATAATGTGAGGAATTCTGTTGTCCTCATGATCATAAA
GGACATTTTGGGCATAAAGATTAGGGGAACAACTATGGTTGATAAATCTCCCCAAATTGCCTTTCCGTGCAG


RU40292 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10001

Probe ID Probe Sequeces


RU40292 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
CAN76871 hypothetical protein [Vitis vinifera] 375 7e-035
CAO41633 unnamed protein product [Vitis vinifera] 375 7e-035
NP_181061 SUVH5 (SU(VAR)3-9 HOMOLOG 5) [Arabidopsis thaliana] 360 4e-033
AAD15582 similar to mammalian MHC III region protein G9a [Arabidopsis thaliana] 348 9e-032
NP_850030 SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] 348 9e-032

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
O82175 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 360 2e-034
Q8VZ17 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 348 6e-033
Q8GZB6 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 239 3e-020
Q6INA9 Histone-lysine N-methyltransferase SETDB1 185 5e-014
Q08BR4 Histone-lysine N-methyltransferase SETDB1-B 181 1e-013

TrEMBL top hits
Blast detail
Accession No. Description Score e value
B9N2W3 SET domain protein (Fragment) 385 5e-036
A5BGK9 Putative uncharacterized protein 375 7e-035
A7R376 Chromosome undetermined scaffold_489, whole genome shotgun sequence 375 7e-035
B9SZ00 Histone-lysine n-methyltransferase, suvh, putative 373 1e-034
A3AW23 Putative uncharacterized protein 340 8e-031

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT2G35160.1 SUVH5 (SU(VAR)3-9 HOMOLOG 5); histone methyltransferase 360 2e-035
AT2G22740.2 SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase 348 5e-034
AT2G22740.1 SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase 348 5e-034
AT5G13960.1 SUVH4 (SU(VAR)3-9 HOMOLOG 4); double-stranded methylated DNA binding / histone methyltransferase(H3-K9 specific) / methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding 239 2e-021
AT5G04940.1 SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase 175 6e-014