RU40709 sequence (190 bp)


Member Information
TTAAATTACAAACTACCAAGAAAGCCAGTACCTCTGCACAGCCATTCAAAAAGAAGAGGCCAGCAGCTGGTACATTGGTGGT
TTGTCCAGCAAGTGTTCTTCGACAGTGGGCTAGGGAGCTGGACGAGAAGGTTGCAGAGGAAGCAAAATTGTCTGTACTTGTT
TATCATGGAGGCAGCAGAACAAGGAA


RU40709 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10001

Probe ID Probe Sequeces
yueji_07967GGTTGCAGAGGAAGCAAAATTGTCTGTACTTGTTTATCATGGAGGCAGCAGAACAAGGAA bl2seq


RU40709 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
AAF87890 Similar tp transcription factors [Arabidopsis thaliana] 237 7e-019
AAD50036 Similar to transcription factors [Arabidopsis thaliana] 237 7e-019
NP_564568 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] 237 7e-019
NP_188635 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] 222 4e-017
NP_001061138 Os08g0180300 [Oryza sativa (japonica cultivar-group)] 208 2e-015

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
P34739 Transcription termination factor 2 120 2e-006

TrEMBL top hits
Blast detail
Accession No. Description Score e value
Q94BR5 Putative DNA-binding protein 237 7e-019
Q9LPR7 F11F12.23 protein 237 7e-019
Q9SX56 F14I3.1 protein (Fragment) 237 7e-019
B9HG87 Chromatin remodeling complex subunit 228 8e-018
Q9LHE4 Transcription factor-like protein 222 4e-017

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein 237 4e-021
AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein 222 2e-019
AT1G61140.1 EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding 176 5e-014
AT1G61140.2 EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ protein binding / zinc ion binding 176 5e-014
AT1G61140.3 EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding 176 5e-014