RU44058 sequence (286 bp)


Member Information
AACCCCCTCACAGGCGATTATGTTCACAATTTCCCTGGCCAAGCAGTGTTGCTCAACATCGATCCTCTCCTTGCGATTCCTC
GGAAGAGTTACATCAATTGACTCAAACATAGCCGTGTAGTAATTTAGTGTTTCCACAAACCTCGGAAAAAATGCAGCAGTGT
TTGTGTTCGATTCTTGCTCAACAAGGGTCACAACTTTTGGAGACAAGCTCTTAACCAACCTCAATAGCCGATCACGATGATT
CTGAGTGCTGACGCTCTCATCTGGCATGTGATGCAGCATG


RU44058 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
10001

Probe ID Probe Sequeces
yueji_13744TTTTGGAGACAAGCTCTTAACCAACCTCAATAGCCGATCACGATGATTCTGAGTGCTGAC bl2seq


RU44058 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO41200 unnamed protein product [Vitis vinifera] 459 1e-044
BAC42147 putative SCARECROW gene regulator [Arabidopsis thaliana] 442 1e-042
NP_199626 PAT1 (PHYTOCHROME A SIGNAL TRANSDUCTION 1); transcription factor [Arabidopsis thaliana] 442 1e-042
AAO26332 phytochrome A signal transduction 1 protein [Brassica rapa subsp. pekinensis] 430 3e-041
ABD72963 GRAS7 [Solanum lycopersicum] 429 4e-041

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9LDL7 Scarecrow-like transcription factor PAT1 442 7e-044
Q9S7H5 Scarecrow-like protein 21 419 3e-041
Q8H125 Scarecrow-like protein 5 399 7e-039
Q8GVE1 Chitin-inducible gibberellin-responsive protein 2 394 3e-038
Q9M0M5 Scarecrow-like protein 13 380 1e-036

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7Q341 Chromosome chr12 scaffold_47, whole genome shotgun sequence 459 1e-044
B9IAQ7 GRAS family transcription factor 454 4e-044
B9T6K1 Chitin-inducible gibberellin-responsive protein, putative 449 2e-043
B9DGR4 AT5G48150 protein 442 1e-042
Q84XS6 Phytochrome A signal transduction 1 protein (Fragment) 430 3e-041

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G48150.1 PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor 442 6e-045
AT5G48150.2 PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor 442 6e-045
AT2G04890.1 SCL21 (SCARECROW-LIKE 21); transcription factor 419 3e-042
AT1G50600.1 SCL5; transcription factor 399 6e-040
AT4G17230.1 SCL13 (Scarecrow-like 13); transcription factor 380 9e-038