RU44306 sequence (499 bp)


Member Information
GGAATTAGCGGCACTTGTTCTTCTTCCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTAGGGAATACAGAGGGAGAGAGAGAGA
GAGAGAGAGGTATGGCGAGGAGAGCGGACGAGGAATACGACTATTTGTTCAAAGTGGTATTAATCGGCGACTCGGGCGTTGG
GAAATCCAACCTCCTCTCGCGATTCACTCGCAACGAGTTCTGTTTGGAATCCAAGTCCACCATTGGCGTCGAATTTGCCACA
CGTACTCTCCAGGTTGAGGGAAGAACTGTGAAAGCTCAGATATGGGACACAGCACGACAGGAGAGATACAGAGCAATTACTA
GTGCCTACTATAGAGGAGCTCTTGGAGCACTACTTGTTTACGATGTAACAAAACCAACAACATTTGAAAATGTAAGCCGGCG
GCTGAAGGAATTGAGAGACCATGCTGACTCAAACATTGTGATCATGATGATTGGGAACAAGACTGATCTGAAGCATCTACGT
GCCGTTG


RU44306 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
00011

Probe ID Probe Sequeces
yueji_02373CAAACATTGTGATCATGATGATTGGGAACAAGACTGATCTGAAGCATCTACGTGCCGTTG bl2seq


RU44306 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABK94045 unknown [Populus trichocarpa] 663 4e-068
NP_172434 ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] 658 1e-067
CAO46870 unnamed protein product [Vitis vinifera] 658 1e-067
ACG26389 unknown [Zea mays] 648 2e-066
ABE91946 Ras GTPase; Sigma-54 factor, interaction region [Medicago truncatula] 629 3e-064

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O04486 Ras-related protein RABA2a 624 1e-064
Q39434 Ras-related protein Rab2BV 583 7e-060
Q40193 Ras-related protein Rab11C 578 3e-059
Q39572 Ras-related protein YPTC6 569 3e-058
Q96283 Ras-related protein RABA2c 567 5e-058

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7QC87 Chromosome undetermined scaffold_77, whole genome shotgun sequence 624 1e-063
A9PCE2 Predicted protein 624 1e-063
B9N741 Predicted protein 622 2e-063
B9SKB2 Putative uncharacterized protein 621 3e-063
B6SNF6 Ras-related protein Rab11C 618 6e-063

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G09630.1 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding 624 1e-065
AT1G07410.1 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding 576 5e-060
AT5G59150.1 ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding 569 3e-059
AT3G46830.1 ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP binding 567 6e-059
AT5G60860.1 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding 542 4e-056