RU44363 sequence (861 bp)


Member Information
GAGGAAGAGAGAGAGGTATAGCCCCCGAAAAGACTATTTTGACCTTTCGTCATTGCAGCTGCCTTCTCTTCTTCTTCTTCTT
CTTCCTCCTCCTCTCTGCCAATTTCGTTGTACGGTCACCATGAACGAGAAGGCCAACGTCACCAAGGAGCTCAACGCCAAGC
ACAGAAAGATTCTGGAAGGACTTCTTAAATTGCCAGAGAATAGGGAATGTGCTGACTGCAAAGCCAAGGGTCCAAGATGGGC
CAGTGTGAACTTAGGTATCTTTGTATGCATGCAGTGTTCTGGGATCCACAGAAGTCTCGGGGTACACATATCCAAGGTGAGG
TCTGCTACCTTGGACACATGGCTACCAGAGCAGGTGGCATTTATTCAATCAATGGGAAATGAAAAGGCAAATAGTTACTGGG
AAGCAGAACTACCTCCAAACTATGACAGAGTTGGTATTGAAAATTTTATTCGTGCAAAGTATGAAGATAAGAGATGGGTCGC
TAAAGATGGAAAACCAAAATCACCTTCTAGAGGACGTGAGGAAAATGCTTCCACACATTGGCAGAGACCTGTTGAAAGCAGT
GGGCATGGGTATATCGCANATTCTGAAAAGAAATTTGAGGAAAGGAAGAACACACAAACAGCTAGTAGAAGAGACAGTGTTC
CTGCTGGAAGAATCAGTCTTCCTGTTCCTCCTAAAGGGCCTGATCATGTTGTACAGGTCCCAAAACCACAAAATGTTCAGAA
AACAGAACCAGCAGTTCCACAGGCTGAAGCAAACAAGCCAGCTGCTGAAGTTGCTTCTGCTGCGCCTCCAAAGTTGATTATG
CTACTGAACTTTTCGGCATGCTCTCAGTAGAAAGTCCAGTG


RU44363 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
00011

Probe ID Probe Sequeces
yueji_13766ATTCTCTGGCAATTTAAGAAGTCCTTCCAGAATCTTTCTGTGCTTGGCGTTGAGCTCCTT bl2seq


RU44363 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO39208 unnamed protein product [Vitis vinifera] 964 2e-102
AAM67219 ARF GAP-like zinc finger-containing protein ZIGA3 [Arabidopsis thaliana] 793 1e-082
NP_568807 AGD5 (ARF-GAP DOMAIN 5); DNA binding [Arabidopsis thaliana] 791 2e-082
ACG36972 unknown [Zea mays] 714 2e-073
EAZ04350 hypothetical protein OsI_025582 [Oryza sativa (indica cultivar-group)] 700 7e-072

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q9FL69 Probable ADP-ribosylation factor GTPase-activating protein AGD5 760 6e-080
Q0WQQ1 Probable ADP-ribosylation factor GTPase-activating protein AGD15 515 1e-051
Q91VZ6 Stromal membrane-associated protein 1 350 2e-032
Q8IYB5 Stromal membrane-associated protein 1 343 1e-031
Q5F413 Stromal membrane-associated protein 2 337 6e-031

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7P1F8 Chromosome chr19 scaffold_4, whole genome shotgun sequence 913 1e-096
B9N583 Predicted protein 875 3e-092
B9SYH5 Stromal membrane-associated protein, putative 855 7e-090
B9I010 Predicted protein (Fragment) 848 4e-089
B6TIN9 ARF GAP-like zinc finger-containing protein ZIGA3 695 2e-071

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT5G54310.1 AGD5 (ARF-GAP domain 5); ARF GTPase activator/ DNA binding / zinc ion binding 760 6e-081
AT3G17660.1 AGD15 (ARF-GAP domain 15); ARF GTPase activator/ DNA binding / zinc ion binding 515 1e-052
AT4G05330.1 AGD13 (ARF-GAP domain 13); ARF GTPase activator/ zinc ion binding 264 2e-023
AT5G13300.1 SFC (SCARFACE); ARF GTPase activator/ phosphoinositide binding 254 3e-022
AT1G60860.1 AGD2 (ARF-GAP DOMAIN 2); ARF GTPase activator/ protein binding / zinc ion binding 247 2e-021