RU44366 sequence (803 bp)


Member Information
AACAGAAGTTGTCTTCTCTTACATGGTCCGACTCCCATACGGCTTCTCATGTTCCAGCTTTCAACTTTGACGCCTTCATTTC
TTTCAGGTAGGATCTTCAGAGAGAGAGAGAGAGAGAGTCTTGCTTTTTTATGTTATGTGGGTGGTTGAAGAGGCATGGTGGA
CTTCCTTTTCGACTTTGAATTCTTAGCTGAAGAACTCTTCTGGTATTTCTTGGAAGCTCTTGATCTTATAGTGGAACTCTTG
TTTAAACTATACCTGCTACTGGCTTCTTTGATTGAGGATTTTGTTGAATTCTTCTTTTGCCAAATCCTAATTACTTAGGTTC
TTCCTATCATTTAATTCGACACAATCGAGGGCAAGAAATATTCTGTTTATCATCTACCTCCGGAACAAAGAATGATAAATCA
TTCCTAGAATTCGGTCACAGGTAGAATTGGTTGTGGACTAGTTTTGAGGGTTAAGAGTTATGGGCACAATGATGGATTCGAT
TCAAACTACCGTCTATTACTGTTGTGTATCAAAGAGTAACCGGATCCTCTATGCATATAGCGGTGGAGATCACGAAATTGAG
AATTTGGCTACTTTGTGCTTGGAGAAGGCTCCTCCTTTCCATAAATGGTATATTGAAACCTCGGGTAAGAGGACTTATGGGT
TTCTAATTGAAGATGGATATGTTTATTTGACTATTGTCGATGAGAGTCTTGGAACTCCTGGGGTTCTTCAGTTTCTAGATCA
TTTGAGGGACGAGTTNCAGAATATAGCCCAGAAAGGTTCAAGGGGAAGTTTGTCGAGTATGAACT


RU44366 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
00011

Probe ID Probe Sequeces


RU44366 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO44515 unnamed protein product [Vitis vinifera] 437 2e-041
NP_192755 synaptobrevin-related family protein [Arabidopsis thaliana] 353 1e-031
NP_683346 unknown protein [Arabidopsis thaliana] 323 3e-028
AAG51221 unknown protein; 73879-71181 [Arabidopsis thaliana] 306 3e-026
NP_001131754 hypothetical protein LOC100193121 [Zea mays] 250 9e-020

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
Q84WF5 Probable VAMP-like protein At1g33475 323 2e-029

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7Q7T4 Chromosome chr18 scaffold_61, whole genome shotgun sequence 437 2e-041
B9I873 Predicted protein 401 3e-037
B9GXF2 Predicted protein 392 3e-036
Q9SN26 At4g10170 353 1e-031
B9S6Y1 Putative uncharacterized protein 314 3e-027

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G10170.1 synaptobrevin-related family protein 353 8e-034
AT4G10170.2 synaptobrevin-related family protein 353 8e-034
AT1G33475.1 INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: integral to membrane; EXPRESSED IN: inflorescence meristem, male gametophyte, sepal, carpel, petiole; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: synaptobrevin-related family protein (TAIR:AT4G10170.2); Has 148 Blast hits to 148 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 323 2e-030
AT4G27840.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein-related (TAIR:AT5G52990.1); Has 165 Blast hits to 165 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 140 4e-009