RU44942 sequence (420 bp)


Member Information
GAAACTTGAAGAATGCTCCGAAGGTGTTTGTGAAAATGCCTCAGAGAAGAGCCCGGAAGATTTGGGCGGCGAGGAAGAGTGT
GAGGATGAGGATGAGGATGGGATTGTTTGTGCTGTTTGTAAGAGTACAGATGGAGATCCGTCGGATCCGATTGTGTTCTGTG
ACGGGTGTGATCTGATGGTTCATGCCACCTGCTATGGTAATCCCCTTGTAAAGGGTATTCCGGAGGGGGATTGGTTCTGCTT
GCAATGCTCCGGTTCTTCTGAGGCTTCACAGTCCAATGAGTCCTTCTCTTGCTGTCTGTGTCCTGGCAAAGGTGGAGCAATG
AAGCCAACTGGAGATGGCCGGTGGGCACATATTGTGTGCGCGCTTTATGTTCCTGAGGTGTTCTTTAAGGACCCGGAAGGCC
GAGAGGGGAT


RU44942 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
00011

Probe ID Probe Sequeces


RU44942 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO39491 unnamed protein product [Vitis vinifera] 535 2e-053
NP_974313 PHD finger family protein [Arabidopsis thaliana] 493 1e-048
NP_566491 PHD finger family protein [Arabidopsis thaliana] 493 1e-048
EAY72808 hypothetical protein OsI_000655 [Oryza sativa (indica cultivar-group)] 433 1e-041
EAZ10816 hypothetical protein OsJ_000641 [Oryza sativa (japonica cultivar-group)] 427 5e-041

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
P55201 Peregrin 254 4e-022
O95696 Bromodomain-containing protein 1 239 2e-020
Q9ULD4 Bromodomain and PHD finger-containing protein 3 235 6e-020
P55198 Protein AF-17 227 5e-019
P55197 Protein AF-10 225 9e-019

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7P291 Chromosome chr19 scaffold_4, whole genome shotgun sequence 467 1e-045
Q8L8P1 Similar to zinc-finger protein 445 4e-043
Q9LUC1 Genomic DNA, chromosome 3, P1 clone: MIE1 445 4e-043
B9SZ29 Mixed-lineage leukemia protein, putative 431 2e-041
B9GHE7 Predicted protein 411 4e-039

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT3G14740.1 PHD finger family protein 445 5e-045
AT3G14740.2 PHD finger family protein 445 5e-045
AT2G31650.1 ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX); histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding 197 3e-016
AT1G05830.1 ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2); DNA binding / histone methyltransferase(H3-K4 specific) 187 4e-015
AT1G05830.2 ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2); DNA binding / histone methyltransferase(H3-K4 specific) 187 4e-015