RU52197 sequence (221 bp)


Member Information
GTATTGTTTGTTAGTTCTAGTCTTAGGGTTTCGGCCTATTCCTTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCT
GGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT
TGCCGGTGAGGGTCTTCACGAAAATTTGCATCTTGAGAGAGAGAGAGAGAGAGTAGG


RU52197 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01001

Probe ID Probe Sequeces
yueji_06137TTAGTTCTAGTCTTAGGGTTTCGGCCTATTCCTTCAAGCTGCTTGCCAGCAAAGATCAGA bl2seq


RU52197 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
XP_001909229 unnamed protein product [Podospora anserina] 262 9e-022
S42643 ubiquitin / ribosomal protein S27a - potato (fragment) 260 2e-021
XP_001271126 ubiquitin [Aspergillus clavatus NRRL 1] 259 2e-021
EAZ05833 hypothetical protein OsI_027065 [Oryza sativa (indica cultivar-group)] 259 2e-021
EAZ41744 hypothetical protein OsJ_025227 [Oryza sativa (japonica cultivar-group)] 259 2e-021

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
P59263 Ubiquitin 252 8e-022
P69308 Ubiquitin 252 8e-022
P69309 Ubiquitin 252 8e-022
P69310 Ubiquitin 252 8e-022
P69311 Ubiquitin 252 8e-022

TrEMBL top hits
Blast detail
Accession No. Description Score e value
B2AZH3 Predicted CDS Pa_3_4440 (Fragment) 262 9e-022
A1CKM6 Ubiquitin 259 2e-021
A0MKC8 Ubiquitin extension protein 258 3e-021
Q7ZU62 Zgc:66168 protein (Fragment) 258 3e-021
B6SJU5 Polyubiquitin containing 7 ubiquitin monomers 257 3e-021

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G23410.1 ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA) 252 7e-023
AT1G65350.1 UBQ13; protein binding 252 7e-023
AT1G31340.1 RUB1 (RELATED TO UBIQUITIN 1); protein binding 252 7e-023
AT2G47110.1 UBQ6; protein binding 252 7e-023
AT2G35635.1 UBQ7; protein binding 252 7e-023