RU53500 sequence (177 bp)


Member Information
TTTTGTGACCCTCTCTCTCTCTCTCAAACTACCTAGTTCTTTTTGGTCTGGTTTCCATGGCTGGCTCCGGTTCCGGCCAGCC
TCACTACAGAGGCGTGAGGAAGAGGCCGTGGGGTCGCTACGCCGCCGAGATCAGAGACCCGTGGAAGAAGACTAGAGTCTGG
CTCGGCACATTCG


RU53500 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01001

Probe ID Probe Sequeces
yueji_02785TAGTTCTTTTTGGTCTGGTTTCCATGGCTGGCTCCGGTTCCGGCCAGCCTCACTACAGAG bl2seq


RU53500 Annotation


GenBank top hits
Blast detail
Accession No. Description Score e value
NP_001055941 Os05g0497200 [Oryza sativa (japonica cultivar-group)] 193 9e-014
NP_001044519 Os01g0797600 [Oryza sativa (japonica cultivar-group)] 186 6e-013
AAV98701 BTH-induced ERF transcriptional factor 2 [Oryza sativa (indica cultivar-group)] 186 6e-013
ACG24831 unknown [Zea mays] 186 6e-013
ACG41255 unknown [Zea mays] 186 6e-013

Swiss-Prot top hits
Blast detail
Accession No. Description Score e value
Q94ID6 Ethylene-responsive transcription factor 12 183 9e-014
Q9SXS8 Ethylene-responsive transcription factor 3 174 1e-012
Q9LW49 Ethylene-responsive transcription factor 4 169 4e-012
Q9LDE4 Ethylene-responsive transcription factor 7 169 4e-012
Q40477 Ethylene-responsive transcription factor 4 168 5e-012

TrEMBL top hits
Blast detail
Accession No. Description Score e value
A2Y645 Putative uncharacterized protein 193 9e-014
Q75K84 Os05g0497200 protein 193 9e-014
C0J9I3 Ethylene responsive transcription factor 12 189 3e-013
B9RBB0 Ethylene-responsive transcription factor, putative 188 4e-013
A2WVZ6 Putative uncharacterized protein 186 6e-013

Arabidopsis top hits
Blast detail
Accession No. Description Score e value
AT1G28360.1 ERF12 (ERF DOMAIN PROTEIN 12); DNA binding / transcription factor/ transcription repressor 183 7e-015
AT3G20310.1 ERF7 (ETHYLINE RESPONSE FACTOR 7); DNA binding / protein binding / transcription factor/ transcription repressor 169 3e-013
AT1G12980.1 ESR1 (ENHANCER OF SHOOT REGENERATION 1); DNA binding / protein binding / transcription factor 167 5e-013
AT5G44210.1 ERF9 (ERF DOMAIN PROTEIN 9); DNA binding / transcription factor/ transcription repressor 166 7e-013
AT1G50640.1 ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor 162 2e-012