RU53885 sequence (211 bp)


Member Information
ATTCTGCTTGATGGCCTCAATGGCATATTCAACCTGAAAAAGTCTACCTTCCGGGGAGAAAGTGTTTACTCCTCTGTCATAC
TCAGTTCTTGTGAGGAACATCTTGGTTGATACGAAACCCTGGAGATTGATCTGAGGAGAAATTTGATTTGGGAGAGAGAGAG
AGAGCGATGAGGTCTGGCTCTGCTACTAGTGATTTTATGAGAGATGG


RU53885 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01001

Probe ID Probe Sequeces


RU53885 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
CAO45547 unnamed protein product [Vitis vinifera] 169 6e-011
XP_002127299 PREDICTED: similar to 20S proteasome alpha5 subunit [Ciona intestinalis] 166 1e-010
XP_001854661 proteasome subunit alpha type [Culex quinquefasciatus] 165 2e-010
NP_001068278 Os11g0615700 [Oryza sativa (japonica cultivar-group)] 164 2e-010
NP_175788 PAE1 (20S proteasome alpha subunit E1); peptidase [Arabidopsis thaliana] 164 2e-010

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O81149 Proteasome subunit alpha type-5-A 164 1e-011
Q42134 Proteasome subunit alpha type-5-B 164 1e-011
Q9LSU1 Proteasome subunit alpha type-5 164 1e-011
Q9M4T8 Proteasome subunit alpha type-5 164 1e-011
Q5E987 Proteasome subunit alpha type-5 160 4e-011

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
A7P6B1 Proteasome subunit alpha type 169 5e-011
B0WTL4 Proteasome subunit alpha type 165 2e-010
A5BYS9 Proteasome subunit alpha type 164 2e-010
B6T504 Proteasome subunit alpha type 164 2e-010
B6TJB6 Proteasome subunit alpha type 164 2e-010

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT1G53850.1 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase 164 1e-012
AT1G53850.2 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase 164 1e-012
AT3G14290.1 PAE2; endopeptidase/ peptidase/ threonine-type endopeptidase 164 1e-012
AT1G47250.1 PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase 107 5e-006
AT5G42790.1 PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase 107 5e-006