RU59151 sequence (290 bp)


Member Information
GGTTTTATTTTTCCGGTTTATTTTAATTTCCGGTTAGGTTCGGTTAGGTTAGGTACGTACGGGTTACGTTGGTTGTTCGTTA
TTGTTTCATGATGAGAAGACGGGAGAGTCGAGGTTTTTGGTGATGGACGCCAAGTCGTCTGAGCTGGAAACCGTGGCGGAAG
TTAAGCTGCCGCGGCGGGTGCCGTACGGTTTTCACGGTCTGTTTGTGAGGGAGAGTGACCTGAAGAAGTTGTAGTTGACGGC
GTTTAACCACCACATGTTGTGATATATATATATATATATATATA


RU59151 Expression


Digital Expression:
ControlEthyleneWDSGenBankTotal
01001

Probe ID Probe Sequeces


RU59151 Annotation


GenBank top hits
 Blast detail
Accession No. Description Score e value
ABY60886 carotenoid cleavage dioxygenase 4 [Rosa x damascena] 249 3e-020
BAC10552 nine-cis-epoxycarotenoid dioxygenase4 [Pisum sativum] 220 6e-017
NP_193652 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) [Arabidopsis thaliana] 211 7e-016
AAQ54506 9-cis-epoxycarotenoid dioxygenase [Malus x domestica] 207 2e-015
ABK78686 neoxanthin cleavage enzyme-like protein [Brassica rapa] 207 2e-015

Swiss-Prot top hits
 Blast detail
Accession No. Description Score e value
O49675 Probable carotenoid cleavage dioxygenase 4, chloroplastic 211 4e-017
Q84K96 Zeaxanthin cleavage dioxygenase, chromoplast 178 3e-013
O65572 Carotenoid cleavage dioxygenase 1 142 4e-009
Q84KG5 Carotenoid cleavage dioxygenase 139 1e-008
Q8LP17 Carotenoid cleavage dioxygenase 1 135 3e-008

TrEMBL top hits
 Blast detail
Accession No. Description Score e value
B0FLM8 Carotenoid cleavage dioxygenase 4 249 3e-020
Q8LP14 Nine-cis-epoxycarotenoid dioxygenase4 220 6e-017
B9DHY0 AT4G19170 protein (Fragment) 211 7e-016
A0T2N9 Neoxanthin cleavage enzyme-like protein (Fragment) 207 2e-015
Q6V8T9 9-cis-epoxycarotenoid dioxygenase (Fragment) 207 2e-015

Arabidopsis top hits
 Blast detail
Accession No. Description Score e value
AT4G19170.1 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) 212 3e-018
AT3G63520.1 CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1); 9-cis-epoxycarotenoid dioxygenase 142 4e-010
AT3G14440.1 NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3); 9-cis-epoxycarotenoid dioxygenase 134 3e-009
AT3G24220.1 NCED6 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6); 9-cis-epoxycarotenoid dioxygenase 130 9e-009
AT1G30100.1 NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5); 9-cis-epoxycarotenoid dioxygenase 121 1e-007