Tools and databases
Databases and project websites:
Bioinformatics tools:
- Plant MetGenMAP - a web-based tool
for comprehensive mining and integration of gene expression and metabolite changes in the context of
biochemical pathways.
- iTAK - A package to identify and classify
plant transcription factors and protein kinases. It also contains a database of plant transcription
factors, transcriptional regulators and protein kinases
- iAssembler - A de novo assembly
package for transcriptome sequences generated using 454 or Sanger platforms
- VirusDetect - an automated pipeline for
efficient virus discovery using deep sequencing of small RNAs.
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