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Zheng Y, Gao S, Padmanabhan C, Li R, Galvez M, Gutierrez D, Fuentes S, Ling K-S, Kreuze J, Fei Z (2017)
VirusDetect: An automated pipeline for efficient virus discovery using deep sequencing of small RNAs.
Virology 500:130-138
Xu C, Sun X, Taylor A, Jiao C, Xu Y, Cai X, Wang X, Ge C, Pan G, Wang Q, Fei Z, Wang Q (2017)
Diversity, distribution, and evolution of tomato viruses in China uncovered by small RNA sequencing.
J Virology 91:e00173-17
Kreuze, J. (2014)
siRNA deep sequencing and assembly: piecing together viral infections.
In M.L. Gullino and P.J.M. Bonants (eds.), Detection and Diagnostics of Plant Pathogens, Plant Pathology in the 21st Century.5: 21-38
Chen Y-R, Zheng Y, Liu B, Zhong S, Giovannoni J, Fei Z (2012)
A cost-effective method for Illumina small RNA-Seq library preparation using T4 RNA ligase 1 adenylated adapters.
Plant Methods 8:4
Li R, Gao S, Hernandez AG, Wechter WP, Fei Z, Ling K-S (2012)
Deep sequencing of small RNAs in tomato for virus and viroid identification and strain differentiation.
PLoS ONE 7:e37127
Kreuze JF, Perez A, Untiveros M, Quispe D, Fuentes S, Barker I, Simon R (2009)
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Virology 388:1-7
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